RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 AP2S1P53680 142 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 DEFB1P60022 68 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 SNRPD3P62318 126 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 DHODHQ02127 395 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 NEDD8Q15843 81 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 SOHLH1Q5JUK2 328 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 C1orf134Q5TEV5 83 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 GDF5OSQ5U4N7 250 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 CROCCP3Q8IVE0 287 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 ENY2Q9NPA8 101 aa10.42□□□□□ -0.74
SEC61A1-207ENST00000498837 LRP1BQ9NZR2 4599 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 M0QYG6 137 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 SCGB2A1O75556 95 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 HLA-DRB4P13762 266 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 HTN3P15516 51 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 RND2P52198 227 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 RND3P61587 244 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 USF2Q15853 346 aaPredicted RBP10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 RNF212Q495C1 297 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 PRSS54Q6PEW0 395 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 SNX29P2Q8IUI4 249 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 Q8WTZ3 238 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 FAM210BQ96KR6 192 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 Q9H521 79 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 NRN1Q9NPD7 142 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 DKK2Q9UBU2 259 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 HLA-DRB4X5D2U9 266 aa10.41□□□□□ -0.74
SEC61A1-207ENST00000498837 TMEM189A5PLL7 270 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 SMIM9A6NGZ8 99 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 IL4P05112 153 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 PIGPP57054 158 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 YPEL3P61236 119 aaPredicted RBP10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 SP6Q3SY56 376 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 FAM222AQ5U5X8 452 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 SIGLEC15Q6ZMC9 328 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 OR1S2Q8NGQ3 325 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 NIPSNAP3BQ9BS92 247 aa10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.74
SEC61A1-207ENST00000498837 C3orf85A0A1B0GTC6 90 aa10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 BUB3O43684 328 aa10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 OR10J1P30954 320 aa10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 RCVRNP35243 200 aa10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 NKX2-1P43699 371 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 LSM3P62310 102 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 TNP2Q05952 138 aa10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 ZNF486Q96H40 463 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 SCPEP1Q9HB40 452 aa10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 RFNGQ9Y644 331 aa10.39□□□□□ -0.75
SEC61A1-207ENST00000498837 RPS10-NUDT3A0A1W2PQS6 291 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 ATG12O94817 140 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 NXPH3O95157 252 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 HTR2BP41595 481 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 TRIM16LQ309B1 348 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 LHFPL1Q86WI0 220 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 MAPKAPK5-AS1Q8N8E1 139 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 COMMD3Q9UBI1 195 aa10.38□□□□□ -0.75
SEC61A1-207ENST00000498837 SMIM31A0A1B0GVY4 71 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 CDK2AP2O75956 126 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 SLC25A4P12235 298 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 SPCS3P61009 180 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 RNASE12Q5GAN4 147 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 TMEM88Q6PEY1 159 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 ZNF709Q8N972 641 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 RNASE11Q8TAA1 199 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 TMEM170AQ8WVE7 144 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 NPIPB3Q92617 1050 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 WDR12Q9GZL7 423 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 SLC35B3Q9H1N7 401 aa10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 HEYLQ9NQ87 328 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-207ENST00000498837 APOA1P02647 267 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 UCP1P25874 307 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 OXA1LQ15070 435 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 C1orf158Q8N1D5 194 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 OR4B1Q8NGF8 309 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 OR51G1Q8NGK1 321 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 LINC00052Q96N35 136 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 SAV1Q9H4B6 383 aaPredicted RBP10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 COPZ2Q9P299 210 aa10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 APOBP04114 4563 aaKnown RBP10.36□□□□□ -0.75
SEC61A1-207ENST00000498837 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 GSTZ1O43708 216 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 TOMM40O96008 361 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 CD3DP04234 171 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 RD3LP0DJH9 198 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 PSG1P11464 419 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 ELK1P19419 428 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 AARDQ4LEZ3 155 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 OR52E5Q8NH55 327 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 RNASEH2CQ8TDP1 164 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 KLK11Q9UBX7 282 aa10.35□□□□□ -0.75
SEC61A1-207ENST00000498837 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
SEC61A1-207ENST00000498837 DAD1P61803 113 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms