RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 CD300EQ496F6 205 aaPredicted RBP7.89□□□□□ -1.15
PTPRN-218ENST00000497977 ZNF600Q6ZNG1 722 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 OR4D5Q8NGN0 318 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 CACNG8Q8WXS5 425 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 GRAMD2BQ96HH9 432 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 ZC4H2Q9NQZ6 224 aa7.89□□□□□ -1.15
PTPRN-218ENST00000497977 SYNGR2O43760 224 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 PITX3O75364 302 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 RNASE2P10153 161 aaKnown RBP7.88□□□□□ -1.15
PTPRN-218ENST00000497977 CXCL3P19876 107 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 NPY1RP25929 384 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 AP2S1P53680 142 aaPredicted RBP7.88□□□□□ -1.15
PTPRN-218ENST00000497977 MFAP2P55001 183 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 H2BFSP57053 126 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 PVRIGQ6DKI7 326 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 OR11H7Q8NGC8 314 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 TMEM190Q8WZ59 177 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
PTPRN-218ENST00000497977 C2orf50Q96LR7 162 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
PTPRN-218ENST00000497977 NEURL2Q9BR09 285 aa7.88□□□□□ -1.15
PTPRN-218ENST00000497977 IGHV3-35A0A0C4DH35 117 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 OR4C46A6NHA9 309 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 K7EPK0 472 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 L7N2F9 121 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 CFDP00746 253 aaPredicted RBP7.87□□□□□ -1.15
PTPRN-218ENST00000497977 IGHV3-48P01763 117 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 MBPP02686 304 aaPredicted RBP7.87□□□□□ -1.15
PTPRN-218ENST00000497977 NUP62P37198 522 aaPredicted RBP7.87□□□□□ -1.15
PTPRN-218ENST00000497977 BCAP31P51572 246 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 CD81P60033 236 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 RRAS2P62070 204 aaPredicted RBP7.87□□□□□ -1.15
PTPRN-218ENST00000497977 VAMP2P63027 116 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 RAB32Q13637 225 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 BSXQ3C1V8 233 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 SPANXN5Q5MJ07 72 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 S100A7AQ86SG5 101 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 TMEM116Q8NCL8 245 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 OR1S2Q8NGQ3 325 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 METTL26Q96S19 204 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 CHRDL1Q9BU40 450 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 SMPXQ9UHP9 88 aa7.87□□□□□ -1.15
PTPRN-218ENST00000497977 TMEM213A2RRL7 107 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 ZNF785A8K8V0 405 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 OR11H12B2RN74 326 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 TSPAN4O14817 238 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 SCAF4O95104 1147 aaKnown RBP7.86□□□□□ -1.15
PTPRN-218ENST00000497977 IGHV4-30-4P0DP06 118 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 YPEL3P61236 119 aaPredicted RBP7.86□□□□□ -1.15
PTPRN-218ENST00000497977 RPL11P62913 178 aaKnown RBP7.86□□□□□ -1.15
PTPRN-218ENST00000497977 SLC35E1Q96K37 410 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 RHPN1-AS1Q9BWJ2 59 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 PSENENQ9NZ42 101 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 WNK1Q9H4A3 2382 aa7.86□□□□□ -1.15
PTPRN-218ENST00000497977 PRKDCP78527 4128 aaKnown RBP7.85□□□□□ -1.15
PTPRN-218ENST00000497977 IGHV7-4-1A0A0J9YVY3 117 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 DNASE2O00115 360 aaPredicted RBP7.85□□□□□ -1.15
PTPRN-218ENST00000497977 FRMD6-AS1P0C7T7 363 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 RD3LP0DJH9 198 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 OR10J1P30954 320 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 ADMP35318 185 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 CAV2P51636 162 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 BTNL8Q6UX41 500 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 TOMM20LQ6UXN7 152 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 UNQ9165/PRO28630Q6UXU0 137 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 Q8N1Y9 231 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 FAM110AQ9BQ89 295 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 RNF24Q9Y225 148 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 STRAPQ9Y3F4 350 aaKnown RBP7.85□□□□□ -1.15
PTPRN-218ENST00000497977 PUS1Q9Y606 427 aaKnown RBP eCLIP7.85□□□□□ -1.15
PTPRN-218ENST00000497977 U3KQK5 164 aa7.85□□□□□ -1.15
PTPRN-218ENST00000497977 HELTA6NFD8 242 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 ZFP92A6NM28 416 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 CCNKO75909 580 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 PVALBP20472 110 aaPredicted RBP7.84□□□□□ -1.15
PTPRN-218ENST00000497977 ID3Q02535 119 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 OR8G2PQ6IF36 304 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 HAPLN4Q86UW8 402 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 TMEM61Q8N0U2 210 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 TMEM170AQ8WVE7 144 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 PPP1R1CQ8WVI7 109 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 NPIPB3Q92617 1050 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 RAB40CQ96S21 281 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 NMES1Q9C002 83 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 OR5AC2Q9NZP5 309 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 MBD2Q9UBB5 411 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 MLXQ9UH92 298 aa7.84□□□□□ -1.15
PTPRN-218ENST00000497977 A0A1B0GVG6 124 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 SMCO3A2RU48 225 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
PTPRN-218ENST00000497977 CHEK1O14757 476 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 DEDDO75618 318 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 METTL15P1P0C7V9 234 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 PET100P0DJ07 73 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 RND2P52198 227 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 TAS2R30P59541 319 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 CYCSP99999 105 aaKnown RBP7.83□□□□□ -1.16
PTPRN-218ENST00000497977 MLANAQ16655 118 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms