RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SPATA3Q8NHX4 192 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 NT5CQ8TCD5 201 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 PGLYRP2Q96PD5 576 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 AGPAT4-IT1Q9H0P7 198 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 ARRDC1-AS1Q9H2J1 176 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 OR2W1Q9Y3N9 320 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 AMMECR1Q9Y4X0 333 aaPredicted RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 SAMD9LQ8IVG5 1584 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 PDCD11Q14690 1871 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 SBF2Q86WG5 1849 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 LAMB2P55268 1798 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 SDCBPO00560 298 aaPredicted RBP2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 IGHV3-7P01780 117 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 C3orf79P0CE67 100 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 SMIM13P0DJ93 91 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 CRISP2P16562 243 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 CAV3P56539 151 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 EBI3Q14213 229 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 ELOCQ15369 112 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 STPG1Q5TH74 334 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 C22orf39Q6P5X5 142 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 KCTD18Q6PI47 426 aaPredicted RBP2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF493Q6ZR52 646 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 TMEM136Q6ZRR5 245 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 TMEM179BQ7Z7N9 219 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 TRAPPC6BQ86SZ2 158 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 RAB42Q8N4Z0 105 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 RFLNBQ8N5W9 214 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 LINC00311Q8N616 119 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 OR10AC1Q8NH08 325 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 STAG3L4Q8TBR4 150 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 NABP1Q96AH0 204 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 PRO0461Q9UI25 63 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 KLK5Q9Y337 293 aaPredicted RBP2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 DNAJC15Q9Y5T4 150 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 ANK1P16157 1881 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 TRAV12-2A0A075B6T6 113 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 TRBV5-7A0A0A0MS05 114 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 IRGMA1A4Y4 181 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 RBAKDNA6NC62 111 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 A8MWL6 223 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 APOHP02749 345 aaPredicted RBP2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 PTHLHP12272 177 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 CCL1P22362 96 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 HBG1P69891 147 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 HBG2P69892 147 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 LAGE3Q14657 143 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF726P1Q15940 193 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 MS4A13Q5J8X5 152 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 PRR15Q8IV56 129 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 NRACQ8N912 160 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 LY6G5BQ8NDX9 201 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 OR2T6Q8NHC8 308 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 LMX1AQ8TE12 382 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 DLX4Q92988 240 aaPredicted RBP2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 FAM19A4Q96LR4 140 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 AICDAQ9GZX7 198 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 TNFRSF19Q9NS68 423 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 ABRACLQ9P1F3 81 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 TAAR2Q9P1P5 351 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 NEUROG3Q9Y4Z2 214 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 CSAG2Q9Y5P2 127 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 KIF26AQ9ULI4 1882 aaPredicted RBP2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 SCN10AQ9Y5Y9 1956 aa2.45□□□□□ -2.02
SNRNP48-202ENST00000496946 PEAK1Q9H792 1746 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 DSPPQ9NZW4 1301 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 IGLV3-22A0A075B6J6 115 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 TRBV19A0A075B6N1 114 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 SMIM26A0A096LP01 95 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 PLAC8L1A1L4L8 177 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 FAM24AA6NFZ4 105 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 A8MWV9 139 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 F6UB75 175 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 CDX4O14627 284 aaPredicted RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 LYPD3O95274 346 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 RBP4P02753 201 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 ATP1B1P05026 303 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 COX7CP15954 63 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 COX5AP20674 150 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 RPS18P62269 152 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 ECSCRQ19T08 205 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 GTSCR1Q86UQ5 136 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 FBXL14Q8N1E6 418 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 WFDC11Q8NEX6 87 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 GTSF1Q8WW33 167 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 LSM10Q969L4 123 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 RBMXL1Q96E39 390 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 KCNS1Q96KK3 526 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 LINC00479Q96M42 142 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 GPX7Q96SL4 187 aaPredicted RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 SHANK2-AS3Q9BTD1 123 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 NMES1Q9C002 83 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 SDF2L1Q9HCN8 221 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 SCRT2Q9NQ03 307 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 DEPPQ9NTK1 212 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 RBM12B-AS1Q9P1G2 102 aa2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 F11RQ9Y624 299 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 DNMT1P26358 1616 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 BAZ2AQ9UIF9 1905 aaKnown RBP2.44□□□□□ -2.02
SNRNP48-202ENST00000496946 TRPM7Q96QT4 1865 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms