RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 DLEC1Q9Y238 1755 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 RHODO00212 210 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 CCL21O00585 134 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 RNASE2P10153 161 aaKnown RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 IGFBP3P17936 291 aaPredicted RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 ID3Q02535 119 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 SPINK14Q6IE38 97 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 ZNF71Q9NQZ8 489 aaPredicted RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 CXCL5P42830 114 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 TEX38Q6PEX7 206 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 ZNF474Q6S9Z5 364 aaPredicted RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 CT55Q8WUE5 264 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 ZNF703Q9H7S9 590 aaPredicted RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 ORMDL1Q9P0S3 153 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 CHD5Q8TDI0 1954 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 TRAV14DV4A0A0A6YYC5 116 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 H3BMG7 143 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 MRPS18AQ9NVS2 196 aaKnown RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 ABCA3Q99758 1704 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 COL11A1P12107 1806 aaPredicted RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 TRBV24-1A0A075B6N3 115 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 A0A0B4J2C4 111 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 PYY3Q5JQD4 70 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 LINC01551Q86U37 167 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 TMEM141Q96I45 108 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 FOXD3Q9UJU5 478 aaPredicted RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 S4R3C0 116 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 PLXNB2O15031 1838 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 A0A1W2PPM0 123 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 UBE2BP63146 152 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 WFDC12Q8WWY7 111 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 SCN4AP35499 1836 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 IGKV6D-21A0A0A0MT36 114 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 C22orf46C9J442 243 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 LMO7DNF2Z398 122 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 EREGO14944 169 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 OCC1Q8TAD7 63 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 LEAP2Q969E1 77 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 NUP214P35658 2090 aaPredicted RBP4.33□□□□□ -1.72
NF1-216ENST00000495910 ATG2BQ96BY7 2078 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 KIAA1551Q9HCM1 1747 aa4.33□□□□□ -1.72
NF1-216ENST00000495910 TRBV5-5A0A0J9YX44 114 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 C3orf36Q3SXR2 165 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 C1orf100Q5SVJ3 147 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 FAM27BQ5VT28 67 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PDFQ9HBH1 243 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PDCD11Q14690 1871 aaKnown RBP4.32□□□□□ -1.72
NF1-216ENST00000495910 TRBV5-4A0A0C4DH59 114 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 HLA-DMBP28068 263 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 CDKN1BP46527 198 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 UBE2AP49459 152 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 CBLN3Q6UW01 205 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 ATRAIDQ6UW56 229 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 TNFRSF12AQ9NP84 129 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 LHX9Q9NQ69 397 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PRO1854Q9UHT4 67 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 IGHV3-73A0A0B4J1V6 119 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 IGHV1-24A0A0C4DH33 117 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 HOXB3P14651 431 aaPredicted RBP4.32□□□□□ -1.72
NF1-216ENST00000495910 DEFB103AP81534 67 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 ZNF525Q8N782 197 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 NTN5Q8WTR8 489 aaPredicted RBP4.32□□□□□ -1.72
NF1-216ENST00000495910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.32□□□□□ -1.72
NF1-216ENST00000495910 SRRM4A7MD48 611 aaKnown RBP4.32□□□□□ -1.72
NF1-216ENST00000495910 CLPSP04118 112 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PSG4Q00888 419 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 FGF11Q92914 225 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 A0A1W2PRX2 142 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 H3BQ85 93 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 LTBRP36941 435 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 VDAC2P45880 294 aaPredicted RBP4.32□□□□□ -1.72
NF1-216ENST00000495910 C1orf53Q5VUE5 145 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PRSS41Q7RTY9 318 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 RNF125Q96EQ8 232 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 TRGV1A0A0A0MS02 117 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PRSS47A8MTI9 375 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 IGKV1D-33P01593 117 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 IGKV1-33P01594 117 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PLAC1Q9HBJ0 212 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 CGB7P0DN87 165 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 PFN2P35080 140 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 KLHDC9Q8NEP7 349 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
NF1-216ENST00000495910 TRAV40A0A0B4J280 105 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 CRYGCP07315 174 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 LCN12Q6JVE5 192 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 ZNF826PQ6ZT77 177 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 ZNF664Q8N3J9 261 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 C8orf46Q8TAG6 207 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 IMMP1LQ96LU5 166 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 GPHA2Q96T91 129 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 DPM3Q9P2X0 92 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 CAMTA1Q9Y6Y1 1673 aa4.31□□□□□ -1.72
NF1-216ENST00000495910 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms