RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 NPIPB3Q92617 1050 aa6.87□□□□□ -1.31
EPHA4-213ENST00000495693 ZNF48Q96MX3 618 aaPredicted RBP6.87□□□□□ -1.31
EPHA4-213ENST00000495693 RBM14Q96PK6 669 aaKnown RBP6.87□□□□□ -1.31
EPHA4-213ENST00000495693 RASL11BQ9BPW5 248 aa6.87□□□□□ -1.31
EPHA4-213ENST00000495693 PYGO2Q9BRQ0 406 aa6.87□□□□□ -1.31
EPHA4-213ENST00000495693 GAR1Q9NY12 217 aaKnown RBP6.87□□□□□ -1.31
EPHA4-213ENST00000495693 ARFGEF3Q5TH69 2177 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 YLPM1P49750 1951 aaKnown RBP6.86□□□□□ -1.31
EPHA4-213ENST00000495693 IGHV3-72A0A0B4J1Y9 119 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 HELTA6NFD8 242 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 C5orf52A6NGY3 159 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 CGB1A6NKQ9 187 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 NPIPB5A8MRT5 1133 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 OVOL3O00110 214 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 HYPMO75409 117 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 TOX4O94842 621 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 TYMSP04818 313 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 SMIM6P0DI80 62 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 GNG4P50150 75 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
EPHA4-213ENST00000495693 GNB1P62873 340 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 FOXL1Q12952 345 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 KIAA0141Q14154 515 aaPredicted RBP6.86□□□□□ -1.31
EPHA4-213ENST00000495693 HES1Q14469 280 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 C5orf64Q2M2E5 130 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 MIR17HGQ75NE6 70 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 OR5AU1Q8NGC0 362 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 OR51G1Q8NGK1 321 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 CFHR4Q92496 578 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 SFRP2Q96HF1 295 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 PAXXQ9BUH6 204 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 MEGF9Q9H1U4 602 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 OR51M1Q9H341 326 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 FBXL15Q9H469 300 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 DMXL1Q9Y485 3027 aa6.86□□□□□ -1.31
EPHA4-213ENST00000495693 IGKV1OR2-108A0A075B7D4 117 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 PSMB11A5LHX3 300 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 TEX22C9J3V5 150 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 GGCTO75223 188 aaKnown RBP6.85□□□□□ -1.31
EPHA4-213ENST00000495693 PFN1P07737 140 aaKnown RBP6.85□□□□□ -1.31
EPHA4-213ENST00000495693 TMEM11P17152 192 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 CDKN1AP38936 164 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 AKR1D1P51857 326 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 FXYD3Q14802 87 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 C10orf55Q5SWW7 151 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 OR10G8Q8NGN5 311 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 OR2T6Q8NHC8 308 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 FAM122AQ96E09 287 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 C16orf92Q96LL3 132 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 CCL19Q99731 98 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 TXN2Q99757 166 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 SIRPDQ9H106 197 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 FNDC4Q9H6D8 234 aaPredicted RBP6.85□□□□□ -1.31
EPHA4-213ENST00000495693 ZNF355PQ9NSJ1 428 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 HIGD1AQ9Y241 93 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 URGCP-MRPS24S4R325 110 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 PLCE1Q9P212 2302 aa6.85□□□□□ -1.31
EPHA4-213ENST00000495693 TRBV9A0A0B4J1U6 114 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 E7EUB6 86 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 OR10J4P0C629 311 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 S100A2P29034 98 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 MRGPRG-AS1Q2M3A8 158 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 HCP5Q6MZN7 132 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 CLEC2AQ6UVW9 174 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 LINC00305Q7Z4B0 112 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 ZFP82Q8N141 532 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 C2CD4CQ8TF44 421 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 TMEM37Q8WXS4 190 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 ARPC1AQ92747 370 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 PITPNC1Q9UKF7 332 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 CDC42EP3Q9UKI2 254 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 HILPDAQ9Y5L2 63 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 TET2Q6N021 2002 aaPredicted RBP6.84□□□□□ -1.31
EPHA4-213ENST00000495693 POLEQ07864 2286 aa6.84□□□□□ -1.31
EPHA4-213ENST00000495693 CELSR3Q9NYQ7 3312 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 IGKV1D-37A0A075B6S9 117 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 TGIF2-C20orf24A0A0A6YYL0 155 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 A0A1W2PPQ1 181 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 K7EQM0 130 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 ISLRO14498 428 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 TOMM40O96008 361 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 HLA-DRB1P01911 266 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 CXCL1P09341 107 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 GATA3P23771 443 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 FCGR2BP31994 310 aaPredicted RBP6.83□□□□□ -1.32
EPHA4-213ENST00000495693 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
EPHA4-213ENST00000495693 UQCRFS1P47985 274 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 RAB9AP51151 201 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 MFAP4P55083 255 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 YPEL3P61236 119 aaPredicted RBP6.83□□□□□ -1.32
EPHA4-213ENST00000495693 SNRPEP62304 92 aaKnown RBP6.83□□□□□ -1.32
EPHA4-213ENST00000495693 S100A12P80511 92 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 FABP9Q0Z7S8 132 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 SMUG1Q53HV7 270 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 TEX38Q6PEX7 206 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 LINC00518Q8N0U6 118 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 LYPD1Q8N2G4 141 aa6.83□□□□□ -1.32
EPHA4-213ENST00000495693 TTC9CQ8N5M4 171 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms