RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-205	ENST00000495653	ACY3	Q96HD9	319 aa		10.47	□□□□□ -0.73
PTPN23-205	ENST00000495653	GINS3	Q9BRX5	216 aa		10.47	□□□□□ -0.73
PTPN23-205	ENST00000495653	NUDT15	Q9NV35	164 aa		10.47	□□□□□ -0.73
PTPN23-205	ENST00000495653	TRAV30	A0A087WSZ9	112 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	IGHV3-66	A0A0C4DH42	116 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	WRB	O00258	174 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	TSPAN4	O14817	238 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	SYNGR2	O43760	224 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	SCGB2A1	O75556	95 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	IFNA21	P01568	189 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	OR10J1	P30954	320 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	OR1S2	Q8NGQ3	325 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	ST8SIA2	Q92186	375 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	SPAG8	Q99932	426 aa	Predicted RBP	10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	WDR12	Q9GZL7	423 aa	Known RBP	10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	SRD5A3	Q9H8P0	318 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	BATF3	Q9NR55	127 aa		10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	PAIP2B	Q9ULR5	123 aa	Known RBP	10.46	□□□□□ -0.73
PTPN23-205	ENST00000495653	DNAH9	Q9NYC9	4486 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	IGKV3-7	A0A075B6H7	116 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	FAM240B	A0A1B0GVZ2	78 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	UPK1B	O75841	260 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	ASAH1	Q13510	395 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	HAGH	Q16775	308 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	LILRB2	Q8N423	598 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	OR4D5	Q8NGN0	318 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	MITD1	Q8WV92	249 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	SEC22C	Q9BRL7	303 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	UBQLN2	Q9UHD9	624 aa		10.45	□□□□□ -0.74
PTPN23-205	ENST00000495653	RBMY1B	A6NDE4	496 aa	Known RBP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	RBMY1E	A6NEQ0	496 aa	Known RBP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653		H3BP45	60 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	CCS	O14618	274 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	H2AFB2	P0C5Z0	115 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	RBMY1D	P0C7P1	496 aa	Known RBP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	TFPI2	P48307	235 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	ATP5I	P56385	69 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	YPEL3	P61236	119 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	POLR2G	P62487	172 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	IFITM3	Q01628	133 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	ID3	Q02535	119 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	IAH1	Q2TAA2	248 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	MZT2B	Q6NZ67	158 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	TCF24	Q7RTU0	167 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	RCHY1	Q96PM5	261 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	CIB3	Q96Q77	187 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	TM2D3	Q9BRN9	247 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	VSIR	Q9H7M9	311 aa		10.44	□□□□□ -0.74
PTPN23-205	ENST00000495653	NPPC	P23582	126 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	GPX4	P36969	197 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	NKX2-1	P43699	371 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	RAB11A	P62491	216 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	GAMT	Q14353	236 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	ODF3L2	Q3SX64	289 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	SPANXN5	Q5MJ07	72 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	FAM90A2P	Q658T7	463 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	GBGT1	Q8N5D6	347 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	ZNF431	Q8TF32	576 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653		Q8WTZ3	238 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	SLC35E1	Q96K37	410 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	METTL26	Q96S19	204 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	ZMAT4	Q9H898	229 aa		10.43	□□□□□ -0.74
PTPN23-205	ENST00000495653	TENM3	Q9P273	2699 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	OR4C46	A6NHA9	309 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	SSSCA1	O60232	199 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	DFFB	O76075	338 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	SCGB1D2	O95969	90 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	CRYBB3	P26998	211 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	BMI1	P35226	326 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	USF2	Q15853	346 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	WWC2-AS2	Q96NR7	200 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	CITED4	Q96RK1	184 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	GSKIP	Q9P0R6	139 aa		10.42	□□□□□ -0.74
PTPN23-205	ENST00000495653	IGKV1D-37	A0A075B6S9	117 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	ZFP92	A6NM28	416 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	PRSS46	E5RG02	174 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	TOMM40	O96008	361 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	IL4	P05112	153 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	RD3L	P0DJH9	198 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	PSG1	P11464	419 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	RPP30	P78346	268 aa	Known RBP	10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	ENKUR	Q8TC29	256 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	RETN	Q9HD89	108 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	PSENEN	Q9NZ42	101 aa		10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	STRAP	Q9Y3F4	350 aa	Known RBP	10.41	□□□□□ -0.74
PTPN23-205	ENST00000495653	STAB2	Q8WWQ8	2551 aa		10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	FAM25E	A8MYX2	175 aa		10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	P2RY1	P47900	373 aa		10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	RPL11	P62913	178 aa	Known RBP	10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	ZNF90	Q03938	601 aa		10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	WFDC3	Q8IUB2	231 aa		10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	SPATA25	Q9BR10	227 aa		10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	TMEM231	Q9H6L2	316 aa		10.4	□□□□□ -0.74
PTPN23-205	ENST00000495653	IGKV1OR2-108	A0A075B7D4	117 aa		10.39	□□□□□ -0.75
PTPN23-205	ENST00000495653		A0A1W2PS18	150 aa		10.39	□□□□□ -0.75
PTPN23-205	ENST00000495653	CCNK	O75909	580 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms