RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PAXXQ9BUH6 204 aa5.7□□□□□ -1.5
GARNL3-219ENST00000495172 CCL28Q9NRJ3 127 aa5.7□□□□□ -1.5
GARNL3-219ENST00000495172 OR2W1Q9Y3N9 320 aa5.7□□□□□ -1.5
GARNL3-219ENST00000495172 ICOSQ9Y6W8 199 aa5.7□□□□□ -1.5
GARNL3-219ENST00000495172 FKBP6O75344 327 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 NQO2P16083 231 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 NPBWR1P48145 328 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 CNN1P51911 297 aaKnown RBP5.69□□□□□ -1.5
GARNL3-219ENST00000495172 AP2S1P53680 142 aaPredicted RBP5.69□□□□□ -1.5
GARNL3-219ENST00000495172 TAS2R31P59538 309 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 ZNF415Q09FC8 603 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 POU2AF1Q16633 256 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 C9orf47Q6ZRZ4 202 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 HSD17B13Q7Z5P4 300 aaPredicted RBP5.69□□□□□ -1.5
GARNL3-219ENST00000495172 CDH26Q8IXH8 852 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 MRPL48Q96GC5 212 aaKnown RBP5.69□□□□□ -1.5
GARNL3-219ENST00000495172 DOK5Q9P104 306 aa5.69□□□□□ -1.5
GARNL3-219ENST00000495172 A8MTW9 85 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 PRAF2O60831 178 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 UBBP0CG47 229 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 PTHLHP12272 177 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 PRDX6P30041 224 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 MRPL28Q13084 256 aaKnown RBP5.68□□□□□ -1.5
GARNL3-219ENST00000495172 ZIK1Q3SY52 487 aaPredicted RBP5.68□□□□□ -1.5
GARNL3-219ENST00000495172 THOC7Q6I9Y2 204 aaKnown RBP5.68□□□□□ -1.5
GARNL3-219ENST00000495172 THAP8Q8NA92 274 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 OR51H1Q8NH63 302 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 LGALS14Q8TCE9 139 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 BABAM2Q9NXR7 383 aa5.68□□□□□ -1.5
GARNL3-219ENST00000495172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.68□□□□□ -1.5
GARNL3-219ENST00000495172 TMEM235A6NFC5 223 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 ZNF98A6NK75 572 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 IBA57-AS1B1ANH7 110 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 BUB3O43684 328 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 IGHV3-30P01768 117 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 IGHV3-33P01772 117 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 RLN2P04090 185 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 CDK1P06493 297 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 IGHV3-30-3P0DP02 117 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 IGHV3-30-5P0DP03 117 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 GATA2P23769 480 aaPredicted RBP5.67□□□□□ -1.5
GARNL3-219ENST00000495172 G6PCP35575 357 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 TAS2R60P59551 318 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 PRCDQ00LT1 54 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 DHODHQ02127 395 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 C1orf100Q5SVJ3 147 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 NKAIN3Q8N8D7 197 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 SECTM1Q8WVN6 248 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 KLK11Q9UBX7 282 aa5.67□□□□□ -1.5
GARNL3-219ENST00000495172 HPRT1P00492 218 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 KRASP01116 189 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 GYPEP15421 78 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 PSMB3P49720 205 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 CCDC58Q4VC31 144 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 BPIFB6Q8NFQ5 453 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 TMEM263Q8WUH6 116 aaKnown RBP5.66□□□□□ -1.5
GARNL3-219ENST00000495172 NRBF2Q96F24 287 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 C8orf49Q96NF6 230 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 URM1Q9BTM9 101 aaKnown RBP5.66□□□□□ -1.5
GARNL3-219ENST00000495172 PARD6GQ9BYG4 376 aaPredicted RBP5.66□□□□□ -1.5
GARNL3-219ENST00000495172 RPH3ALQ9UNE2 315 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
GARNL3-219ENST00000495172 TRAV5A0A0B4J249 113 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 G3V2T6 193 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 ZNF324O75467 553 aaPredicted RBP5.65□□□□□ -1.5
GARNL3-219ENST00000495172 CLN5O75503 358 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 ADAP1O75689 374 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 IL4P05112 153 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 ID1P41134 155 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 SRSF3P84103 164 aaKnown RBP5.65□□□□□ -1.5
GARNL3-219ENST00000495172 ST3GAL4Q11206 333 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 TMEM37Q8WXS4 190 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 PPP1R14BQ96C90 147 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 TMEM56Q96MV1 263 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 GFI1Q99684 422 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 GABARAPL3Q9BY60 117 aa5.65□□□□□ -1.5
GARNL3-219ENST00000495172 TRGV2A0A075B6R0 118 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 E5RGE8 158 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 BOLA2-SMG1P6H3BVE0 249 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 RBFOX2O43251 390 aaKnown RBP eCLIP5.64□□□□□ -1.51
GARNL3-219ENST00000495172 DIRAS3O95661 229 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 ASAH1Q13510 395 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 NEGR1Q7Z3B1 354 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 AMIGO2Q86SJ2 522 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 SPATA24Q86W54 205 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 C10orf126Q8N4M7 172 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 RNF182Q8N6D2 247 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 OR6F1Q8NGZ6 308 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 TMEM203Q969S6 136 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 DNAJC30Q96LL9 226 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 TAGLN3Q9UI15 199 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 OAZ3Q9UMX2 235 aa5.64□□□□□ -1.51
GARNL3-219ENST00000495172 SNAPC5O75971 98 aa5.63□□□□□ -1.51
GARNL3-219ENST00000495172 GABRB1P18505 474 aa5.63□□□□□ -1.51
GARNL3-219ENST00000495172 B2MP61769 119 aa5.63□□□□□ -1.51
GARNL3-219ENST00000495172 SMN1Q16637 294 aaKnown RBP5.63□□□□□ -1.51
GARNL3-219ENST00000495172 IZUMO4Q1ZYL8 232 aa5.63□□□□□ -1.51
GARNL3-219ENST00000495172 SPATA31B1PQ5VZV4 182 aa5.63□□□□□ -1.51
GARNL3-219ENST00000495172 GPR141Q7Z602 305 aa5.63□□□□□ -1.51
GARNL3-219ENST00000495172 OR56B1Q8NGI3 324 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms