RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CLN5O75503 358 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 KRTAP10-9P60411 292 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 CLEC12BQ2HXU8 276 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 ZNF674Q2M3X9 581 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 C15orf54Q8N8G6 183 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 OR4X1Q8NH49 305 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 TXNDC17Q9BRA2 123 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 SLC25A2Q9BXI2 301 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 CHD6Q8TD26 2715 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 POLQO75417 2590 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 A0A096LNT2 108 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 TRAV5A0A0B4J249 113 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 TRAV40A0A0B4J280 105 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 KLF17Q5JT82 389 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-225ENST00000494465 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 YPEL4Q96NS1 127 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 FANCD2OSQ96PS1 177 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 RNF2Q99496 336 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 C1RLQ9NZP8 487 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 NAT8Q9UHE5 227 aa13.05□□□□□ -0.32
ATG4B-225ENST00000494465 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 LOC105371267A0A1B0GV96 52 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 COX7A2P2O60397 106 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 HLA-DRB1P01911 266 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 BRD3OSQ6XYD6 125 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 TTC9CQ8N5M4 171 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 OR1L6Q8NGR2 347 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 OR1L4Q8NGR5 311 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 UHRF2Q96PU4 802 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 PFDN5Q99471 154 aa13.04□□□□□ -0.32
ATG4B-225ENST00000494465 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.04□□□□□ -0.325e-8■■■■■ 29.2
ATG4B-225ENST00000494465 B4DEV8 164 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 IGHV4-38-2P0DP08 117 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 TAS2R45P59539 299 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 C10orf113Q5VZT2 155 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 IGLV11-55A0A075B6I3 123 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 F6UZH7 168 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 OR7C2O60412 319 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 SLC25A16P16260 332 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 TMEM241Q24JQ0 296 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 HIST1H2BAQ96A08 127 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 DERL1Q9BUN8 251 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 TMEM167BQ9NRX6 74 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
ATG4B-225ENST00000494465 BPIFB3P59826 476 aa13.02□□□□□ -0.32
ATG4B-225ENST00000494465 PIFOQ8TCI5 191 aa13.02□□□□□ -0.32
ATG4B-225ENST00000494465 ZNF355PQ9NSJ1 428 aa13.02□□□□□ -0.32
ATG4B-225ENST00000494465 B4DSR2 109 aa13.02□□□□□ -0.33
ATG4B-225ENST00000494465 TSPAN9O75954 239 aa13.02□□□□□ -0.33
ATG4B-225ENST00000494465 NDUFB4O95168 129 aa13.02□□□□□ -0.33
ATG4B-225ENST00000494465 OR2C1O95371 312 aa13.02□□□□□ -0.33
ATG4B-225ENST00000494465 IGKV1-17P01599 117 aa13.02□□□□□ -0.33
ATG4B-225ENST00000494465 RPL23P62829 140 aaKnown RBP13.02□□□□□ -0.33
ATG4B-225ENST00000494465 C7orf69Q9H7B7 122 aa13.02□□□□□ -0.33
ATG4B-225ENST00000494465 ELOA3CA0A087WX78 387 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-225ENST00000494465 A0A0U1RQK1 487 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 SCO2A0A1W2PP80 73 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 OR10J4P0C629 311 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 PLP1P60201 277 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 FAM24BQ8N5W8 94 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 RBM14Q96PK6 669 aaKnown RBP13.01□□□□□ -0.33
ATG4B-225ENST00000494465 RASL11BQ9BPW5 248 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 MEGF9Q9H1U4 602 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 ORM2P19652 201 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 OR5AU1Q8NGC0 362 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 HIF1ANQ9NWT6 349 aa13.01□□□□□ -0.33
ATG4B-225ENST00000494465 SOX21Q9Y651 276 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-225ENST00000494465 AVPP01185 164 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 CRYBA1P05813 215 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 PSG1P11464 419 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 TIGITQ495A1 244 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 OR1B1Q8NGR6 318 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 C11orf52Q96A22 123 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 TENM4Q6N022 2769 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 MT-ND4LP03901 98 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 ADIRFQ15847 76 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 C5orf56Q8N8D9 126 aa13□□□□□ -0.33
ATG4B-225ENST00000494465 TRBV20OR9-2A0A075B6H5 130 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 PYYP10082 97 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 RNF212Q495C1 297 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 OR5T1Q8NG75 326 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 SGMS2Q8NHU3 365 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 TMEM242Q9NWH2 141 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 ABCA12Q86UK0 2595 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 CXorf65A6NEN9 183 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 GGTLC3B5MD39 225 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 F8W735 103 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-225ENST00000494465 ZNF343Q6P1L6 599 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 TMEM219Q86XT9 240 aa12.99□□□□□ -0.33
ATG4B-225ENST00000494465 TRAV20A0A0B4J274 112 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 SH2D7A6NKC9 451 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-225ENST00000494465 LINC01548A6NM66 108 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 ATP6V0E1O15342 81 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 HYPMO75409 117 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 FOLR2P14207 255 aa12.98□□□□□ -0.33
ATG4B-225ENST00000494465 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms