RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SMDT1Q9H4I9 107 aa16.15■□□□□ 0.18
KPNA1-210ENST00000494339 SLC39A9Q9NUM3 307 aa16.15■□□□□ 0.18
KPNA1-210ENST00000494339 CDC42EP3Q9UKI2 254 aa16.15■□□□□ 0.18
KPNA1-210ENST00000494339 S4R3C0 116 aa16.15■□□□□ 0.18
KPNA1-210ENST00000494339 DNAJC9-AS1A6NH13 148 aa16.14■□□□□ 0.17
KPNA1-210ENST00000494339 AP4M1O00189 453 aa16.14■□□□□ 0.17
KPNA1-210ENST00000494339 RPL29P47914 159 aaKnown RBP16.14■□□□□ 0.17
KPNA1-210ENST00000494339 SCGB2A2Q13296 93 aa16.14■□□□□ 0.17
KPNA1-210ENST00000494339 TMEM86BQ8N661 226 aa16.14■□□□□ 0.17
KPNA1-210ENST00000494339 NPFFR1Q9GZQ6 430 aa16.14■□□□□ 0.17
KPNA1-210ENST00000494339 PXMP4Q9Y6I8 212 aa16.14■□□□□ 0.17
KPNA1-210ENST00000494339 CTXND1A0A1B0GTU2 59 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 MIC13Q5XKP0 118 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 SCRT1Q9BWW7 348 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 EIF5A2Q9GZV4 153 aaKnown RBP16.13■□□□□ 0.17
KPNA1-210ENST00000494339 THYN1Q9P016 225 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 A0A1B0GV50 99 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 NDUFB8O95169 186 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 OR10J1P30954 320 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 CCL20P78556 96 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 CCDC28AQ8IWP9 274 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 TMEM116Q8NCL8 245 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 MS4A10Q96PG2 267 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 TMEM231Q9H6L2 316 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 ESM1Q9NQ30 184 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 FBXL7Q9UJT9 491 aa16.13■□□□□ 0.17
KPNA1-210ENST00000494339 MAP1LC3B2A6NCE7 125 aa16.12■□□□□ 0.17
KPNA1-210ENST00000494339 ZFP92A6NM28 416 aa16.12■□□□□ 0.17
KPNA1-210ENST00000494339 LCN15Q6UWW0 184 aa16.12■□□□□ 0.17
KPNA1-210ENST00000494339 PRSS22Q9GZN4 317 aa16.12■□□□□ 0.17
KPNA1-210ENST00000494339 MAP1LC3BQ9GZQ8 125 aa16.12■□□□□ 0.17
KPNA1-210ENST00000494339 SEC14L6B5MCN3 397 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 INAFM1C9JVW0 142 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 HIST1H1BP16401 226 aaKnown RBP16.11■□□□□ 0.17
KPNA1-210ENST00000494339 B2MP61769 119 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 RHOGP84095 191 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 IGKV1D-37A0A075B6S9 117 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 RBFOX3A6NFN3 312 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 GATA2P23769 480 aaPredicted RBP16.11■□□□□ 0.17
KPNA1-210ENST00000494339 PMS2P11Q13670 270 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 SSX7Q7RTT5 188 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 STPG3Q8N7X2 389 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 ZNF702PQ9H963 129 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 SLC45A2Q9UMX9 530 aa16.11■□□□□ 0.17
KPNA1-210ENST00000494339 YIF1AO95070 293 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 IGHV3-23P01764 117 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 PPIFP30405 207 aaKnown RBP16.1■□□□□ 0.17
KPNA1-210ENST00000494339 CDC34P49427 236 aaPredicted RBP16.1■□□□□ 0.17
KPNA1-210ENST00000494339 PRR20EP86478 221 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 PRR20CP86479 221 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 PRR20DP86480 221 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 PRR20BP86481 221 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 PRR20AP86496 221 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 ZNF90Q03938 601 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 FAM122CQ6P4D5 195 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 THAP8Q8NA92 274 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 OR4X1Q8NH49 305 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 SEC11CQ9BY50 192 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 CUBNO60494 3623 aa16.1■□□□□ 0.17
KPNA1-210ENST00000494339 TRBV9A0A0B4J1U6 114 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 C15orf32Q32M92 178 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 GCSAMLQ5JQS6 135 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 C10orf91Q5T1B1 145 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 RAB24Q969Q5 203 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 SLC25A22Q9H936 323 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 FAM181BA6NEQ2 426 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 F8W036 122 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 CYP2G1PQ6ZSU1 146 aa16.09■□□□□ 0.17
KPNA1-210ENST00000494339 A0A1W2PPV4 95 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 TCRBV4S1A1TA0A5B7 111 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 APOC3P02656 99 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 SFTA3P0C7M3 94 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 KLK9Q2XQG4 91 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 NECAP1Q8NC96 275 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 C21orf62Q9NYP8 219 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 KLK9Q9UKQ9 250 aa16.08■□□□□ 0.16
KPNA1-210ENST00000494339 CARHSP1Q9Y2V2 147 aaKnown RBP16.08■□□□□ 0.16
KPNA1-210ENST00000494339 CLN5O75503 358 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 IFNA1P01562 189 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 LINC00869P0C866 280 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 ZNF506Q5JVG8 444 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 ZNF329Q86UD4 541 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 ZNF418Q8TF45 676 aaPredicted RBP16.07■□□□□ 0.16
KPNA1-210ENST00000494339 EIF3GO75821 320 aaKnown RBP eCLIP16.07■□□□□ 0.16
KPNA1-210ENST00000494339 TRGV3P03979 118 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 IGLC1P0CG04 106 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 FGF8P55075 233 aaPredicted RBP16.07■□□□□ 0.16
KPNA1-210ENST00000494339 MFAP4P55083 255 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 Q56UQ5 140 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 KHDC3LQ587J8 217 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 C19orf24Q9BVV8 132 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 ZNF580Q9UK33 172 aa16.07■□□□□ 0.16
KPNA1-210ENST00000494339 C9JQL5 133 aa16.06■□□□□ 0.16
KPNA1-210ENST00000494339 ADCYAP1P18509 176 aa16.06■□□□□ 0.16
KPNA1-210ENST00000494339 SELENOTP62341 195 aa16.06■□□□□ 0.16
KPNA1-210ENST00000494339 CFHR3Q02985 330 aa16.06■□□□□ 0.16
KPNA1-210ENST00000494339 HAGHQ16775 308 aa16.06■□□□□ 0.16
KPNA1-210ENST00000494339 TRGV9Q99603 122 aa16.06■□□□□ 0.16
KPNA1-210ENST00000494339 SLC35B3Q9H1N7 401 aa16.06■□□□□ 0.16
KPNA1-210ENST00000494339 GNG13Q9P2W3 67 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms