RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 OR4K13Q8NH42 304 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 DCANP1Q8TF63 244 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 C2orf15Q8WU43 125 aaKnown RBP1.54□□□□□ -2.16
PTPN12-212ENST00000494248 BRK1Q8WUW1 75 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 TMEM158Q8WZ71 300 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 ELSPBP1Q96BH3 223 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 DPH3Q96FX2 82 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 VSIG2Q96IQ7 327 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 NAA38Q9BRA0 125 aaKnown RBP1.54□□□□□ -2.16
PTPN12-212ENST00000494248 ADAT1Q9BUB4 502 aaKnown RBP1.54□□□□□ -2.16
PTPN12-212ENST00000494248 DERL1Q9BUN8 251 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 CHAC1Q9BUX1 264 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 BANF2Q9H503 90 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 ZNF286AQ9HBT8 521 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 TP73-AS1Q9UF72 201 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 PTPRTO14522 1441 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 NCAPD3P42695 1498 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 MYH15Q9Y2K3 1946 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 CHD5Q8TDI0 1954 aa1.54□□□□□ -2.16
PTPN12-212ENST00000494248 IGHV3-66A0A0C4DH42 116 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 IGKV1-6A0A0C4DH72 117 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 IGKV1-12A0A0C4DH73 117 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 A0A0D9SEW6 157 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 IGHV7-4-1A0A0J9YVY3 117 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 ODAMA1E959 279 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 OR51F1A6NGY5 319 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 ZNF860A6NHJ4 632 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 A8MWL6 223 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SRRM5B3KS81 715 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 INS-IGF2F8WCM5 200 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 BUB1B-PAK6H3BSN5 160 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CCDC179H3BU77 68 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SETD1AO15047 1707 aaKnown RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SOCS1O15524 211 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SYNJ1O43426 1573 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SLC25A14O95258 325 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 IGKV1D-12P01611 117 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 PRM2P04554 102 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CD14P08571 375 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SPINK8P0C7L1 97 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 ZNF286BP0CG31 522 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 INAFM2P0DMQ5 153 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 ZNF32P17041 273 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SRP14P37108 136 aaKnown RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CXCL5P42830 114 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CSN1S1P47710 185 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 ZNF136P52737 540 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 AKR1C2P52895 323 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 DIO3P55073 304 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 EIF5AP63241 154 aaKnown RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 HBBP68871 147 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CPSF1Q10570 1443 aaKnown RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CATR1Q13166 79 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 LINC01554Q52M75 96 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 AADACL3Q5VUY0 350 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 DNMBPQ6XZF7 1577 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 TIFABQ6ZNK6 161 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CCDC141Q6ZP82 1450 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 SAXO1Q8IYX7 474 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 ATOH7Q8N100 152 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 TEX29Q8N6K0 151 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CD177Q8N6Q3 437 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 ZFP62Q8NB50 900 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 OR5D16Q8NGK9 328 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 OR4A5Q8NH83 315 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 COPS9Q8WXC6 57 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 RBPMSQ93062 196 aaKnown RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 CIB3Q96Q77 187 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 YPEL2Q96QA6 119 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 B9D2Q9BPU9 175 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 GINS4Q9BRT9 223 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 FGF23Q9GZV9 251 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-212ENST00000494248 HEXA-AS1Q9H8Q6 139 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 XAGE1AQ9HD64 81 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 IL36BQ9NZH7 164 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 DEC1Q9P2X7 70 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 MYH2Q9UKX2 1941 aa1.53□□□□□ -2.16
PTPN12-212ENST00000494248 NAV1Q8NEY1 1877 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 FOCADQ5VW36 1801 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 MYO5BQ9ULV0 1848 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 ADAMTSL1Q8N6G6 1762 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.52□□□□□ -2.17
PTPN12-212ENST00000494248 KDM5AP29375 1690 aaKnown RBP1.52□□□□□ -2.17
PTPN12-212ENST00000494248 COL16A1Q07092 1604 aaPredicted RBP1.52□□□□□ -2.17
PTPN12-212ENST00000494248 CEP170Q5SW79 1584 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 KDM5DQ9BY66 1539 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 CLIP1P30622 1438 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 SCAPERQ9BY12 1400 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 IGHV3-43A0A0B4J1X8 118 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 TMEM256-PLSCR3K7ERE1 68 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 UQCRQO14949 82 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 ZNF324O75467 553 aaPredicted RBP1.52□□□□□ -2.17
PTPN12-212ENST00000494248 KLF7O75840 302 aaPredicted RBP1.52□□□□□ -2.17
PTPN12-212ENST00000494248 IGKV1-39P01597 117 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 C1QAP02745 245 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 IGKV1D-39P04432 117 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 TCRAP04437 139 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 CXCL1P09341 107 aa1.52□□□□□ -2.17
PTPN12-212ENST00000494248 ZNF688P0C7X2 276 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms