RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 OR4X1Q8NH49 305 aa8.78□□□□□ -1
UBA3-211ENST00000493957 RNASEH2CQ8TDP1 164 aaKnown RBP8.78□□□□□ -1
UBA3-211ENST00000493957 GAR1Q9NY12 217 aaKnown RBP8.78□□□□□ -1
UBA3-211ENST00000493957 ZMAT5Q9UDW3 170 aaKnown RBP8.78□□□□□ -1
UBA3-211ENST00000493957 UFC1Q9Y3C8 167 aa8.78□□□□□ -1
UBA3-211ENST00000493957 U3KQ87 197 aa8.78□□□□□ -1
UBA3-211ENST00000493957 DNAH9Q9NYC9 4486 aa8.78□□□□□ -1
UBA3-211ENST00000493957 IGHV3OR16-13A0A075B7E8 117 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 IGHV3-74A0A0B4J1X5 117 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 SSSCA1O60232 199 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 MED6O75586 246 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 CCNKO75909 580 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 YIF1AO95070 293 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 SCGB1D2O95969 90 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 IFNA4P05014 189 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 IGLC1P0CG04 106 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 RELQ04864 619 aaPredicted RBP8.77□□□□□ -1.01
UBA3-211ENST00000493957 CD69Q07108 199 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 LCN12Q6JVE5 192 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 NPIPB3Q92617 1050 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 ACY3Q96HD9 319 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 PALMDQ9NP74 551 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 DAZ1Q9NQZ3 744 aaKnown RBP8.77□□□□□ -1.01
UBA3-211ENST00000493957 GSKIPQ9P0R6 139 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 CACFD1Q9UGQ2 172 aa8.77□□□□□ -1.01
UBA3-211ENST00000493957 PAIP2BQ9ULR5 123 aaKnown RBP8.77□□□□□ -1.01
UBA3-211ENST00000493957 RCL1Q9Y2P8 373 aaKnown RBP8.77□□□□□ -1.01
UBA3-211ENST00000493957 PUS1Q9Y606 427 aaKnown RBP eCLIP8.77□□□□□ -1.01
UBA3-211ENST00000493957 RPS10-NUDT3A0A1W2PQS6 291 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 FAM25EA8MYX2 175 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 PRSS46E5RG02 174 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 SCAF4O95104 1147 aaKnown RBP8.76□□□□□ -1.01
UBA3-211ENST00000493957 APOHP02749 345 aaPredicted RBP8.76□□□□□ -1.01
UBA3-211ENST00000493957 IL5P05113 134 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 NKX2-1P43699 371 aaPredicted RBP8.76□□□□□ -1.01
UBA3-211ENST00000493957 ELLP55199 621 aaPredicted RBP8.76□□□□□ -1.01
UBA3-211ENST00000493957 PAX9P55771 341 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 GUCA2BQ16661 112 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 SPANXN5Q5MJ07 72 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 ZNF600Q6ZNG1 722 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 OR2K2Q8NGT1 345 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 WFDC10AQ9H1F0 79 aa8.76□□□□□ -1.01
UBA3-211ENST00000493957 TECRQ9NZ01 308 aaKnown RBP8.76□□□□□ -1.01
UBA3-211ENST00000493957 MRPL27Q9P0M9 148 aaKnown RBP8.76□□□□□ -1.01
UBA3-211ENST00000493957 TENM3Q9P273 2699 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 IGKV1D-37A0A075B6S9 117 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 IGHV3-66A0A0C4DH42 116 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 IGHV7-4-1A0A0J9YVY3 117 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 INMT-MINDY4F8WBC2 141 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 K7EMT4 169 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 MBPP02686 304 aaPredicted RBP8.75□□□□□ -1.01
UBA3-211ENST00000493957 CD7P09564 240 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 SLC25A4P12235 298 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 OR10J1P30954 320 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 GAMTQ14353 236 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 LILRB2Q8N423 598 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 TMEM116Q8NCL8 245 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 MARC2Q969Z3 335 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 SMPXQ9UHP9 88 aa8.75□□□□□ -1.01
UBA3-211ENST00000493957 AGRNO00468 2067 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 C5orf51A6NDU8 294 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 CHEK1O14757 476 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 SIX6O95475 246 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 DEFA1P59665 94 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 DEFA3P59666 94 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 NOXA1Q86UR1 476 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 OR1S2Q8NGQ3 325 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 ST8SIA2Q92186 375 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 CIB3Q96Q77 187 aaPredicted RBP8.74□□□□□ -1.01
UBA3-211ENST00000493957 RNF2Q99496 336 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 ASCL2Q99929 193 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 MARVELD1Q9BSK0 173 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 PSENENQ9NZ42 101 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 LSM5Q9Y4Y9 91 aaKnown RBP8.74□□□□□ -1.01
UBA3-211ENST00000493957 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
UBA3-211ENST00000493957 IGKV1OR2-108A0A075B7D4 117 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 TRAV14DV4A0A0A6YYC5 116 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 PMS2P5A8MQ11 134 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 K7EPK0 472 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 FRMD6-AS1P0C7T7 363 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 IGHV4-30-4P0DP06 118 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 CD81P60033 236 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 RAB11AP62491 216 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
UBA3-211ENST00000493957 ETFRF1Q6IPR1 90 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 SLC35E1Q96K37 410 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 SMIM8Q96KF7 97 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 C2orf50Q96LR7 162 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 B9D2Q9BPU9 175 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 NEURL2Q9BR09 285 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 RHPN1-AS1Q9BWJ2 59 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 C11orf1Q9H5F2 150 aa8.73□□□□□ -1.01
UBA3-211ENST00000493957 STRAPQ9Y3F4 350 aaKnown RBP8.73□□□□□ -1.01
UBA3-211ENST00000493957 TRAV30A0A087WSZ9 112 aa8.72□□□□□ -1.01
UBA3-211ENST00000493957 C7orf66A4D0T2 115 aa8.72□□□□□ -1.01
UBA3-211ENST00000493957 GOSR2O14653 212 aa8.72□□□□□ -1.01
UBA3-211ENST00000493957 METTL15P1P0C7V9 234 aa8.72□□□□□ -1.01
UBA3-211ENST00000493957 GPX4P36969 197 aaPredicted RBP8.72□□□□□ -1.01
UBA3-211ENST00000493957 ATP5IP56385 69 aaPredicted RBP8.72□□□□□ -1.01
UBA3-211ENST00000493957 YPEL3P61236 119 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms