RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 JMJD8Q96S16 334 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 TXN2Q99757 166 aa9.85□□□□□ -0.83
VPS52-220ENST00000493674 IGHV3-21A0A0B4J1V1 117 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 TCRBV4S1A1TA0A5B7 111 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 YIF1AO95070 293 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 IGKV1-17P01599 117 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 MFAP4P55083 255 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 DEFA5Q01523 94 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 RAB31Q13636 194 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 C15orf32Q32M92 178 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 DPPA3Q6W0C5 159 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 TMEM182Q6ZP80 229 aaPredicted RBP9.84□□□□□ -0.83
VPS52-220ENST00000493674 CYP2G1PQ6ZSU1 146 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 ZNF709Q8N972 641 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 RNF141Q8WVD5 230 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 SAT2Q96F10 170 aaPredicted RBP9.84□□□□□ -0.83
VPS52-220ENST00000493674 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 CXorf58Q96LI9 332 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 CCDC140Q96MF4 163 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 C16orf95Q9H693 158 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 PXMP4Q9Y6I8 212 aa9.84□□□□□ -0.83
VPS52-220ENST00000493674 PSMB11A5LHX3 300 aa9.83□□□□□ -0.84
VPS52-220ENST00000493674 SELENOTP62341 195 aa9.83□□□□□ -0.84
VPS52-220ENST00000493674 MIC13Q5XKP0 118 aa9.83□□□□□ -0.84
VPS52-220ENST00000493674 STPG3Q8N7X2 389 aa9.83□□□□□ -0.84
VPS52-220ENST00000493674 VSIRQ9H7M9 311 aa9.83□□□□□ -0.84
VPS52-220ENST00000493674 RPRMQ9NS64 109 aa9.83□□□□□ -0.84
VPS52-220ENST00000493674 COL6A5A8TX70 2615 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 TRAV30A0A087WSZ9 112 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 SEC14L6B5MCN3 397 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 NDUFA7O95182 113 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 TSPAN15O95858 294 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 MBP02144 154 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 TRGV3P03979 118 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 NPBWR1P48145 328 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 RAB2AP61019 212 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 ZNF90Q03938 601 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 FOXE3Q13461 319 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 KIAA0141Q14154 515 aaPredicted RBP9.82□□□□□ -0.84
VPS52-220ENST00000493674 TMEM41BQ5BJD5 291 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 FFAR4Q5NUL3 377 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 PRIMA1Q86XR5 153 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 USMG5Q96IX5 58 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 MS4A10Q96PG2 267 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 KLK15Q9H2R5 256 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 SLC39A9Q9NUM3 307 aa9.82□□□□□ -0.84
VPS52-220ENST00000493674 TRBV7-1A0A0A6YYK4 115 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ZFP92A6NM28 416 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ELANEP08246 267 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 CTSGP08311 255 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 M6PRP20645 277 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ADMP35318 185 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 FHITP49789 147 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 RAB9AP51151 201 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ELLP55199 621 aaPredicted RBP9.81□□□□□ -0.84
VPS52-220ENST00000493674 TPPP2P59282 170 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 PLP1P60201 277 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 YPEL3P61236 119 aaPredicted RBP9.81□□□□□ -0.84
VPS52-220ENST00000493674 B2MP61769 119 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ATP5G2Q06055 141 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ZNF726P1Q15940 193 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 TIGITQ495A1 244 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 AKR1C8PQ5T2L2 129 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 C10orf99Q6UWK7 81 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ZNF329Q86UD4 541 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 RPP25LQ8N5L8 163 aaKnown RBP9.81□□□□□ -0.84
VPS52-220ENST00000493674 BPIFCQ8NFQ6 507 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 RCC1LQ96I51 464 aaKnown RBP9.81□□□□□ -0.84
VPS52-220ENST00000493674 ZNF355PQ9NSJ1 428 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 S4R3C0 116 aa9.81□□□□□ -0.84
VPS52-220ENST00000493674 ZNF705EA8MWA4 302 aaPredicted RBP9.8□□□□□ -0.84
VPS52-220ENST00000493674 TCF21O43680 179 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 GNG7O60262 68 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 TOMM40O96008 361 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 PF4V1P10720 104 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 GATA2P23769 480 aaPredicted RBP9.8□□□□□ -0.84
VPS52-220ENST00000493674 SLC35B1P78383 322 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 ACOT6Q3I5F7 207 aaPredicted RBP9.8□□□□□ -0.84
VPS52-220ENST00000493674 GCSAMLQ5JQS6 135 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 PXDC1Q5TGL8 231 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 ZNF343Q6P1L6 599 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 Q6ZRG5 221 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 SSX7Q7RTT5 188 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 COMMD1Q8N668 190 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 PCNPQ8WW12 178 aaKnown RBP9.8□□□□□ -0.84
VPS52-220ENST00000493674 MED9Q9NWA0 146 aa9.8□□□□□ -0.84
VPS52-220ENST00000493674 GAR1Q9NY12 217 aaKnown RBP9.8□□□□□ -0.84
VPS52-220ENST00000493674 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.79□□□□□ -0.84
VPS52-220ENST00000493674 TRAV1-1A0A0B4J248 108 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 A0A0G2JLM5 398 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 PSG1P11464 419 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 RAB14P61106 215 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 Q56UQ5 140 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
VPS52-220ENST00000493674 SPSB3Q6PJ21 355 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms