RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 GATA3P23771 443 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 FAM103A1Q9BTL3 118 aaKnown RBP11.11□□□□□ -0.63
PTPN7-216ENST00000492977 PARLQ9H300 379 aa11.11□□□□□ -0.63
PTPN7-216ENST00000492977 ABCA2Q9BZC7 2435 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 COL12A1Q99715 3063 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 EPG5Q9HCE0 2579 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 IGHV7-81A0A0B4J1V7 117 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 TMEM238LA0A1B0GVL6 79 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 K7EIM0 57 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 ATP5G3P48201 142 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 PLP1P60201 277 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 PATE2Q6UY27 113 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 RPUSD4Q96CM3 377 aaKnown RBP11.1□□□□□ -0.63
PTPN7-216ENST00000492977 MEGF9Q9H1U4 602 aa11.1□□□□□ -0.63
PTPN7-216ENST00000492977 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 TRAV20A0A0B4J274 112 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 CXorf65A6NEN9 183 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 OR7C2O60412 319 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 OR2C1O95371 312 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 IGLC1P0CG04 106 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-216ENST00000492977 NDPQ00604 133 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 ZNF503Q96F45 646 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 FAM167A-AS1Q96KT0 104 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 C7orf69Q9H7B7 122 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 TMEM242Q9NWH2 141 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 PRELID1Q9Y255 219 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 YTHDF2Q9Y5A9 579 aaKnown RBP11.09□□□□□ -0.63
PTPN7-216ENST00000492977 UBR5O95071 2799 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-216ENST00000492977 TACC2O95359 2948 aa11.09□□□□□ -0.63
PTPN7-216ENST00000492977 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 TRAV40A0A0B4J280 105 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 FABP1P07148 127 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 EGR2P11161 476 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-216ENST00000492977 NPPCP23582 126 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 RBM14Q96PK6 669 aaKnown RBP11.08□□□□□ -0.64
PTPN7-216ENST00000492977 FANCD2OSQ96PS1 177 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 UHRF2Q96PU4 802 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 SLC25A2Q9BXI2 301 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 BEX4Q9NWD9 120 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-216ENST00000492977 THYN1Q9P016 225 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 DOK5Q9P104 306 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 SPG11Q96JI7 2443 aa11.08□□□□□ -0.64
PTPN7-216ENST00000492977 HYPMO75409 117 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 MT-ND4LP03901 98 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 OR51G1Q8NGK1 321 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 SGMS2Q8NHU3 365 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 ZNF48Q96MX3 618 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-216ENST00000492977 ZNF355PQ9NSJ1 428 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 HIF1ANQ9NWT6 349 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 FAM208BQ5VWN6 2430 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 IGHV3OR16-10A0A075B7F0 116 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 TRAV30A0A087WSZ9 112 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 A0A1W2PRE2 83 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 NDUFB4O95168 129 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 ORM2P19652 201 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 CD33P20138 364 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 KIAA0141Q14154 515 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-216ENST00000492977 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 LINC01356Q8N9X3 169 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 STXBP6Q8NFX7 210 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 OR5AU1Q8NGC0 362 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 OR1B1Q8NGR6 318 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 C11orf52Q96A22 123 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 ISOC2Q96AB3 205 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 TMEM68Q96MH6 324 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 CTDSP1Q9GZU7 261 aa11.07□□□□□ -0.64
PTPN7-216ENST00000492977 A0A096LNT2 108 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 TRAV5A0A0B4J249 113 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 IGKV1-17P01599 117 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 FOLR2P14207 255 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 HIST1H1BP16401 226 aaKnown RBP11.06□□□□□ -0.64
PTPN7-216ENST00000492977 MFAP4P55083 255 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 RPL23P62829 140 aaKnown RBP11.06□□□□□ -0.64
PTPN7-216ENST00000492977 ADIRFQ15847 76 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 KLK9Q2XQG4 91 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 RNF212Q495C1 297 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 KLF17Q5JT82 389 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-216ENST00000492977 MORN5Q5VZ52 161 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 BRD3OSQ6XYD6 125 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 LRRC75A-AS1Q8N1F1 130 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 HIST1H2BAQ96A08 127 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 HSPB9Q9BQS6 159 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 PAXXQ9BUH6 204 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 OR51M1Q9H341 326 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 GSX1Q9H4S2 264 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-216ENST00000492977 KLK9Q9UKQ9 250 aa11.06□□□□□ -0.64
PTPN7-216ENST00000492977 A0A0U1RQK1 487 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 LOC105371267A0A1B0GV96 52 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 IGHV4-38-2P0DP08 117 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 PSG1P11464 419 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 COL8A1P27658 744 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 TIGITQ495A1 244 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 YPEL4Q96NS1 127 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms