RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 Q5BKY6 102 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 PXDC1Q5TGL8 231 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 Q6ZRM9 215 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 SNX29P2Q8IUI4 249 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 PINX1Q96BK5 328 aaKnown RBP9.45□□□□□ -0.9
USF1-206ENST00000491629 MOB3AQ96BX8 217 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 SEC22AQ96IW7 307 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 GINS3Q9BRX5 216 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 FXYD6Q9H0Q3 95 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 RNF167Q9H6Y7 350 aa9.45□□□□□ -0.9
USF1-206ENST00000491629 LINC00854A0A1B0GVQ3 168 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 TMEM50AO95807 157 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 EIF4EP06730 217 aaKnown RBP9.44□□□□□ -0.9
USF1-206ENST00000491629 PRCDQ00LT1 54 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 ZNF600Q6ZNG1 722 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 CCDC190Q86UF4 302 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 TPRA1Q86W33 373 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 STXBP6Q8NFX7 210 aa9.44□□□□□ -0.9
USF1-206ENST00000491629 ZNF2Q9BSG1 426 aaPredicted RBP9.44□□□□□ -0.9
USF1-206ENST00000491629 CRYBB3P26998 211 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 SDC2P34741 201 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 HERV-K104P61576 105 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 IZUMO4Q1ZYL8 232 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 SPINK9Q5DT21 86 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 DEDD2Q8WXF8 326 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 FKBP11Q9NYL4 201 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 EHFQ9NZC4 300 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 ANAPC10Q9UM13 185 aa9.43□□□□□ -0.9
USF1-206ENST00000491629 PMP2P02689 132 aa9.42□□□□□ -0.9
USF1-206ENST00000491629 P2RY1P47900 373 aa9.42□□□□□ -0.9
USF1-206ENST00000491629 MXD1Q05195 221 aa9.42□□□□□ -0.9
USF1-206ENST00000491629 ASAH1Q13510 395 aa9.42□□□□□ -0.9
USF1-206ENST00000491629 MLANAQ16655 118 aa9.42□□□□□ -0.9
USF1-206ENST00000491629 RAB40CQ96S21 281 aa9.42□□□□□ -0.9
USF1-206ENST00000491629 FNDC4Q9H6D8 234 aaPredicted RBP9.42□□□□□ -0.9
USF1-206ENST00000491629 GPR31O00270 319 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 NPPCP23582 126 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 HSPE1P61604 102 aaKnown RBP9.41□□□□□ -0.9
USF1-206ENST00000491629 VBP1P61758 197 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 SPANXN2Q5MJ10 180 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 ENKURQ8TC29 256 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 XCL2Q9UBD3 114 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 BOLA1Q9Y3E2 137 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 U3KQE9 123 aa9.41□□□□□ -0.9
USF1-206ENST00000491629 A0A0A6YYH2 397 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 A6NJ64 397 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 CDK2AP2O75956 126 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 IFNA10P01566 189 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 IGKV1-17P01599 117 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 NPBWR1P48145 328 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.9
USF1-206ENST00000491629 SCAND1P57086 179 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 NCS1P62166 190 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 FLI1Q01543 452 aaPredicted RBP9.4□□□□□ -0.9
USF1-206ENST00000491629 TNP2Q05952 138 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 PHLDA2Q53GA4 152 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 CLLU1Q5K131 121 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 IDNKQ5T6J7 187 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 OR4A16Q8NH70 328 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 HYLS1Q96M11 299 aa9.4□□□□□ -0.9
USF1-206ENST00000491629 RNASE2P10153 161 aaKnown RBP9.39□□□□□ -0.91
USF1-206ENST00000491629 POLR2GP62487 172 aaKnown RBP eCLIP9.39□□□□□ -0.91
USF1-206ENST00000491629 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
USF1-206ENST00000491629 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
USF1-206ENST00000491629 ZNF705AQ6ZN79 300 aaPredicted RBP9.39□□□□□ -0.91
USF1-206ENST00000491629 GLMPQ8WWB7 406 aa9.39□□□□□ -0.91
USF1-206ENST00000491629 MRGPRFQ96AM1 343 aa9.39□□□□□ -0.91
USF1-206ENST00000491629 SDHCQ99643 169 aaPredicted RBP9.39□□□□□ -0.91
USF1-206ENST00000491629 TMEM231Q9H6L2 316 aa9.39□□□□□ -0.91
USF1-206ENST00000491629 FAM212BQ9NTI7 297 aaPredicted RBP9.39□□□□□ -0.91
USF1-206ENST00000491629 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
USF1-206ENST00000491629 A0A1W2PS18 150 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 ZNF98A6NK75 572 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
USF1-206ENST00000491629 H3BMM0 161 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 CLN5O75503 358 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 IFNA21P01568 189 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 IFNA17P01571 189 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 P0C879 139 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
USF1-206ENST00000491629 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
USF1-206ENST00000491629 NPY1RP25929 384 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 DEFB1P60022 68 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 ERHP84090 104 aaKnown RBP9.38□□□□□ -0.91
USF1-206ENST00000491629 DHRS2Q13268 280 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 TIGITQ495A1 244 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 NRARPQ7Z6K4 114 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 CMTM1Q8IZ96 169 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 METTL26Q96S19 204 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 NEU1Q99519 415 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 IFT46Q9NQC8 304 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 MBD2Q9UBB5 411 aa9.38□□□□□ -0.91
USF1-206ENST00000491629 A0A0B4J293 547 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 HELTA6NFD8 242 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms