RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 C15orf62A8K5M9 175 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 OR5AC1P0C628 307 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 INAFM2P0DMQ5 153 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 HLA-DMBP28068 263 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 PHLDA2Q53GA4 152 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 THOC7Q6I9Y2 204 aaKnown RBP8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 HSD17B13Q7Z5P4 300 aaPredicted RBP8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 VKORC1L1Q8N0U8 176 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 LHFPL5Q8TAF8 219 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 ASB13Q8WXK3 278 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 C20orf24Q9BUV8 137 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 BET1LQ9NYM9 111 aa8.12□□□□□ -1.11
CLCNKA-206ENST00000491433 DUXBA0A1W2PPF3 345 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 DEFB4AO15263 64 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 RBFOX2O43251 390 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 DFFBO76075 338 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 IGKV1-39P01597 117 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 AMBPP02760 352 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 IGKV1D-39P04432 117 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 REG1AP05451 166 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 RPA2P15927 270 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 VAMP1P23763 118 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 H2BFSP57053 126 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 SP6Q3SY56 376 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 OR2B11Q5JQS5 317 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 SSX9Q7RTT3 188 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 SELENOHQ8IZQ5 122 aaKnown RBP8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 TCTE3Q8IZS6 198 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 TCTEX1D2Q8WW35 142 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 C18orf15Q96N68 181 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 GPHA2Q96T91 129 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 NDUFAF3Q9BU61 184 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 COMMD5Q9GZQ3 224 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 SMPXQ9UHP9 88 aa8.11□□□□□ -1.11
CLCNKA-206ENST00000491433 A0A1B0GW64 132 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 OR2T8A6NH00 312 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 G3V3Q6 166 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 FGF2P09038 288 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 P0C879 139 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 ANXA3P12429 323 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 S100GP29377 79 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 SRPXP78539 464 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 RELQ04864 619 aaPredicted RBP8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 CD300CQ08708 224 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 LGI3Q8N145 548 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 Q8NAQ8 132 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 TMEM116Q8NCL8 245 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 COQ8AQ8NI60 647 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 MGAT4CQ9UBM8 478 aa8.1□□□□□ -1.11
CLCNKA-206ENST00000491433 PIGBOS1A0A0B4J2F0 54 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 IGHV7-4-1A0A0J9YVY3 117 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 M0R2N4 97 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 CHEK1O14757 476 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 TNFSF12O43508 249 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 SSNA1O43805 119 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 CCNKO75909 580 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 IFNA21P01568 189 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 IFNA17P01571 189 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 GIPP09681 153 aaPredicted RBP8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 SLC25A6P12236 298 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 NPY1RP25929 384 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 OR2B8PP59922 312 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 CATR1Q13166 79 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 ZNF124Q15973 351 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 POU2AF1Q16633 256 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 NMSQ5H8A3 153 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 MORN3Q6PF18 240 aaPredicted RBP8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 Q6ZTC4 211 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 AKAP14Q86UN6 197 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 STHQ8IWL8 128 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 LSM10Q969L4 123 aaKnown RBP8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 SEC22AQ96IW7 307 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 RNF2Q99496 336 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 RHPN1-AS1Q9BWJ2 59 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 C21orf62Q9NYP8 219 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 PRR13Q9NZ81 148 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 TMED3Q9Y3Q3 217 aa8.09□□□□□ -1.11
CLCNKA-206ENST00000491433 DEFB131BA0A096LNP1 70 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 IGHV4-28A0A0C4DH34 117 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 IGLC7A0M8Q6 106 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 PITX3O75364 302 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 ADAP1O75689 374 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 IFNA10P01566 189 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 LPAR6P43657 344 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 TFPI2P48307 235 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 RAP2BP61225 183 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 AARDQ4LEZ3 155 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 GGNBP1Q5YKI7 109 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 SLC25A24Q6NUK1 477 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 LYZL2Q7Z4W2 148 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 SLC35G3Q8N808 338 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 RBPMSQ93062 196 aaKnown RBP8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 OR10C1Q96KK4 312 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 QTRT1Q9BXR0 403 aaKnown RBP8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 NMES1Q9C002 83 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 PLEKHA2Q9HB19 425 aa8.08□□□□□ -1.12
CLCNKA-206ENST00000491433 TRAV2A0A0B4J234 112 aa8.07□□□□□ -1.12
CLCNKA-206ENST00000491433 CGB1A6NKQ9 187 aa8.07□□□□□ -1.12
CLCNKA-206ENST00000491433 DNASE2O00115 360 aaPredicted RBP8.07□□□□□ -1.12
CLCNKA-206ENST00000491433 NUPL2O15504 423 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms