RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 HIST1H2BKO60814 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BJP06899 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BOP23527 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BBP33778 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 ID1P41134 155 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BDP58876 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BCP62807 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST2H2BEQ16778 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BHQ93079 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BNQ99877 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 HIST1H2BMQ99879 126 aa5.94□□□□□ -1.46
NPHP3-208ENST00000490993 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 A0A1B0GW15 77 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 M0R2Z0 102 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 GGCTO75223 188 aaKnown RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 NHLRC2Q8NBF2 726 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PRSS3P2Q8NHM4 247 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 SMIM12Q96EX1 92 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 LSM4Q9Y4Z0 139 aaKnown RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 TNRC6AQ8NDV7 1962 aaKnown RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 SRRM4A7MD48 611 aaKnown RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 SLC17A3O00476 420 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PYYP10082 97 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 SLC35B1P78383 322 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 FAM209BQ5JX69 171 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 THAP8Q8NA92 274 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 RPP21Q9H633 154 aaKnown RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 CACNA1DQ01668 2161 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 UBE2E1P51965 193 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PRR20EP86478 221 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PRR20CP86479 221 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PRR20DP86480 221 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PRR20BP86481 221 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PRR20AP86496 221 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 TMEM78Q5T7P6 136 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 Q6AWC8 147 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 ZNF600Q6ZNG1 722 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 AP1S3Q96PC3 154 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 GNB1LQ9BYB4 327 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 ZFP30Q9Y2G7 519 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 A6NNC1 897 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 ORM1P02763 201 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 S100A4P26447 101 aaKnown RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 HBBP68871 147 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 PRB3Q04118 309 aaPredicted RBP5.93□□□□□ -1.46
NPHP3-208ENST00000490993 ODF3L1Q8IXM7 274 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 LYPD1Q8N2G4 141 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 CLEC5AQ9NY25 188 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 DMRT1Q9Y5R6 373 aa5.93□□□□□ -1.46
NPHP3-208ENST00000490993 TRAV5A0A0B4J249 113 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 A0A0G2JLM5 398 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 TOMM40O96008 361 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 SNRPCP09234 159 aaKnown RBP5.92□□□□□ -1.46
NPHP3-208ENST00000490993 PSG1P11464 419 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 KLRD1Q13241 179 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 SCGB2A2Q13296 93 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 RASL11AQ6T310 242 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 ZNF562Q6V9R5 426 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 FREM1Q5H8C1 2179 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 KMT2EQ8IZD2 1858 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 TRAV34A0A0B4J273 112 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 SLC25A39Q9BZJ4 359 aaPredicted RBP5.92□□□□□ -1.46
NPHP3-208ENST00000490993 PF4V1P10720 104 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 CBLN1P23435 193 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 ZNF137PP52743 207 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 SSTP61278 116 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 CYB5R2Q6BCY4 276 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 CIARTQ8N365 385 aaPredicted RBP5.92□□□□□ -1.46
NPHP3-208ENST00000490993 ZNF114Q8NC26 417 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 OR11H6Q8NGC7 330 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 C7orf69Q9H7B7 122 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 MOB4Q9Y3A3 225 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 KIAA1549Q9HCM3 1950 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 ADORA2A-AS1P86434 159 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 WT1-ASQ06250 92 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 BATFQ16520 125 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 FAM106AQ4KMX7 169 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 C16orf92Q96LL3 132 aa5.92□□□□□ -1.46
NPHP3-208ENST00000490993 DOCK7Q96N67 2140 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 IGHV2-70DA0A0C4DH43 119 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 NPFFO15130 113 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 TRGV3P03979 118 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 C11orf52Q96A22 123 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 PGLYRP4Q96LB8 373 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 SLC50A1Q9BRV3 221 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 NAGKQ9UJ70 344 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 HSPB8Q9UJY1 196 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 CENPFP49454 3210 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 H3BTX0 84 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 CX3CL1P78423 397 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 ACTL10Q5JWF8 245 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 ATP5L2Q7Z4Y8 100 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 OR10J6PQ8NGY7 276 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 DERL1Q9BUN8 251 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 KIAA2026Q5HYC2 2103 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 SMIM17P0DL12 118 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 SRIP30626 198 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 MLANAQ16655 118 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 KHDC1LQ5JSQ8 128 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms