RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	SAMD12	Q8N8I0	201 aa		10.87	□□□□□ -0.67
AGAP3-222	ENST00000490839	NRN1	Q9NPD7	142 aa		10.87	□□□□□ -0.67
AGAP3-222	ENST00000490839	RFNG	Q9Y644	331 aa		10.87	□□□□□ -0.67
AGAP3-222	ENST00000490839	HLA-DRB4	X5D2U9	266 aa		10.87	□□□□□ -0.67
AGAP3-222	ENST00000490839	LRP1B	Q9NZR2	4599 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	ETV6	P41212	452 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	RND3	P61587	244 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	MLANA	Q16655	118 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	BSX	Q3C1V8	233 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	OR1S2	Q8NGQ3	325 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	GPX8	Q8TED1	209 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839		Q8WTZ3	238 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	NIPSNAP3B	Q9BS92	247 aa		10.86	□□□□□ -0.67
AGAP3-222	ENST00000490839	C16orf90	A8MZG2	172 aa		10.85	□□□□□ -0.67
AGAP3-222	ENST00000490839	IGLC1	P0CG04	106 aa		10.85	□□□□□ -0.67
AGAP3-222	ENST00000490839	YPEL3	P61236	119 aa	Predicted RBP	10.85	□□□□□ -0.67
AGAP3-222	ENST00000490839	OXA1L	Q15070	435 aa		10.85	□□□□□ -0.67
AGAP3-222	ENST00000490839	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.85	□□□□□ -0.67
AGAP3-222	ENST00000490839	DKK2	Q9UBU2	259 aa		10.85	□□□□□ -0.67
AGAP3-222	ENST00000490839	GSTZ1	O43708	216 aa	Predicted RBP	10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	RCVRN	P35243	200 aa		10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	NKX2-1	P43699	371 aa	Predicted RBP	10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	FAM3B	P58499	235 aa	Predicted RBP	10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	USF2	Q15853	346 aa	Predicted RBP	10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	FAM222A	Q5U5X8	452 aa		10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	MAPKAPK5-AS1	Q8N8E1	139 aa		10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	ZNF486	Q96H40	463 aa	Predicted RBP	10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	TP53RK	Q96S44	253 aa		10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	SCPEP1	Q9HB40	452 aa		10.84	□□□□□ -0.67
AGAP3-222	ENST00000490839	BUB3	O43684	328 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	IL4	P05112	153 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	SLC25A4	P12235	298 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	PGAM2	P15259	253 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	OR10J1	P30954	320 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	RND2	P52198	227 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	DHODH	Q02127	395 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	PRSS54	Q6PEW0	395 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	SIGLEC15	Q6ZMC9	328 aa		10.83	□□□□□ -0.68
AGAP3-222	ENST00000490839	IGHV3OR16-12	A0A075B7B8	117 aa		10.82	□□□□□ -0.68
AGAP3-222	ENST00000490839	HTN3	P15516	51 aa		10.82	□□□□□ -0.68
AGAP3-222	ENST00000490839	HTR2B	P41595	481 aa		10.82	□□□□□ -0.68
AGAP3-222	ENST00000490839	PIGP	P57054	158 aa		10.82	□□□□□ -0.68
AGAP3-222	ENST00000490839	RRNAD1	Q96FB5	475 aa	Known RBP	10.82	□□□□□ -0.68
AGAP3-222	ENST00000490839	CLUHP3	Q96NS8	147 aa		10.82	□□□□□ -0.68
AGAP3-222	ENST00000490839	C3orf85	A0A1B0GTC6	90 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	PI3	P19957	117 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	TGFBR1	P36897	503 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	RPS19	P39019	145 aa	Known RBP	10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	SPCS3	P61009	180 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	TNP2	Q05952	138 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	NEDD8	Q15843	81 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	TRIM16L	Q309B1	348 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	AARD	Q4LEZ3	155 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	GDF5OS	Q5U4N7	250 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	TMEM88	Q6PEY1	159 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	FOXI2	Q6ZQN5	318 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	C15orf53	Q8NAA6	179 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	RNASE11	Q8TAA1	199 aa	Known RBP	10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	SAV1	Q9H4B6	383 aa	Predicted RBP	10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839	TMED3	Q9Y3Q3	217 aa		10.81	□□□□□ -0.68
AGAP3-222	ENST00000490839		A0A0G2JRQ6	117 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839		M0QYG6	137 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	IGKV3-20	P01619	116 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	NUP62	P37198	522 aa	Predicted RBP	10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	FXYD7	P58549	80 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	C2orf83	Q53S99	150 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	SNX29P2	Q8IUI4	249 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	ZNF709	Q8N972	641 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	OR52E5	Q8NH55	327 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839		Q9H521	79 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	GOLT1B	Q9Y3E0	138 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	DNAH5	Q8TE73	4624 aa		10.8	□□□□□ -0.68
AGAP3-222	ENST00000490839	APOB	P04114	4563 aa	Known RBP	10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	LOC102723971	A0A1B0GUV8	181 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	SMIM31	A0A1B0GVY4	71 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	TOMM40	O96008	361 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	HBE1	P02100	147 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	RD3L	P0DJH9	198 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	UCP1	P25874	307 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	SPATA31B1P	Q5VZV4	182 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	ETFRF1	Q6IPR1	90 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	LHFPL1	Q86WI0	220 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	FAM219A	Q8IW50	185 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	SLC24A4	Q8NFF2	622 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	HEYL	Q9NQ87	328 aa	Predicted RBP	10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	COPZ2	Q9P299	210 aa		10.79	□□□□□ -0.68
AGAP3-222	ENST00000490839	B3GALNT1	O75752	331 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	APOA1	P02647	267 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	PSMB3	P49720	205 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	DEFB1	P60022	68 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	DAD1	P61803	113 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	ZNF79	Q15937	498 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	RNASE10	Q5GAN6	216 aa	Known RBP	10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839		Q8N1X5	172 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	ARRDC1	Q8N5I2	433 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	CCDC71L	Q8N9Z2	235 aa		10.78	□□□□□ -0.68
AGAP3-222	ENST00000490839	C7orf50	Q9BRJ6	194 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms