RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	DAZAP1	Q96EP5	407 aa	Known RBP	5.11	□□□□□ -1.59
FN1-223	ENST00000490833	GPR82	Q96P67	336 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	RASL11B	Q9BPW5	248 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	LPAR2	Q9HBW0	351 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	GSN-AS1	Q9NRJ2	163 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	CLEC5A	Q9NY25	188 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	NAT8B	Q9UHF3	227 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	ZFP30	Q9Y2G7	519 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	KLF12	Q9Y4X4	402 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	IZUMO1R	A6ND01	250 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	FCN1	O00602	326 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	PHOX2A	O14813	284 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	MMP23A	O75900	390 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	IGHV3-7	P01780	117 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	TFF1	P04155	84 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	NBEAP1	P0C6P0	100 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	CRISP2	P16562	243 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	NPPC	P23582	126 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	CRYBB3	P26998	211 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	WT1-AS	Q06250	92 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	USF2	Q15853	346 aa	Predicted RBP	5.1	□□□□□ -1.59
FN1-223	ENST00000490833	TNXA	Q16473	311 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	SPRN	Q5BIV9	151 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	GCSAML	Q5JQS6	135 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	TPTE2P1	Q5T6R2	138 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	FAM53A	Q6NSI3	398 aa	Predicted RBP	5.1	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF562	Q6V9R5	426 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF841	Q6ZN19	808 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	C22orf34	Q6ZV56	151 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	MIR17HG	Q75NE6	70 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	LINC00305	Q7Z4B0	112 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	BAGE2	Q86Y30	109 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	LURAP1L	Q8IV03	231 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	OR4F17	Q8NGA8	305 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	OR4B1	Q8NGF8	309 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	CMTM2	Q8TAZ6	248 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	TMEM37	Q8WXS4	190 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	GRAMD2B	Q96HH9	432 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	HIST1H2BL	Q99880	126 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	ATG101	Q9BSB4	218 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.1	□□□□□ -1.59
FN1-223	ENST00000490833	OTOR	Q9NRC9	128 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	SH3BGRL2	Q9UJC5	107 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	EPDR1	Q9UM22	224 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	HIGD1A	Q9Y241	93 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	YTHDF2	Q9Y5A9	579 aa	Known RBP	5.1	□□□□□ -1.59
FN1-223	ENST00000490833	USP34	Q70CQ2	3546 aa		5.1	□□□□□ -1.59
FN1-223	ENST00000490833	CNOT1	A5YKK6	2376 aa	Known RBP	5.09	□□□□□ -1.59
FN1-223	ENST00000490833	SMIM27	A0A1W2PRY6	76 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	IGLC7	A0M8Q6	106 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	PSMB11	A5LHX3	300 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	NPIPB5	A8MRT5	1133 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF705G	A8MUZ8	300 aa	Predicted RBP	5.09	□□□□□ -1.59
FN1-223	ENST00000490833	LY6L	H3BQJ8	138 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	PEX7	O00628	323 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	NBR2	O15453	112 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	NDUFA3	O95167	84 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	NDUFB8	O95169	186 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	AMY1A	P04745	511 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	FAM87A	P0C7U9	286 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	RD3L	P0DJH9	198 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	PMCH	P20382	165 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	FCGR2B	P31994	310 aa	Predicted RBP	5.09	□□□□□ -1.59
FN1-223	ENST00000490833	CSN1S1	P47710	185 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	MFAP4	P55083	255 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	RPL15	P61313	204 aa	Known RBP	5.09	□□□□□ -1.59
FN1-223	ENST00000490833	PSG9	Q00887	426 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	CENPW	Q5EE01	88 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	FAM209B	Q5JX69	171 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	LYPD2	Q6UXB3	125 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	C19orf35	Q6ZS72	473 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	GBGT1	Q8N5D6	347 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	C11orf42	Q8N5U0	333 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	NECAP1	Q8NC96	275 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	OR5T1	Q8NG75	326 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	SRSF12	Q8WXF0	261 aa	Known RBP	5.09	□□□□□ -1.59
FN1-223	ENST00000490833	MISP3	Q96FF7	219 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	C1orf159	Q96HA4	380 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	GPR61	Q9BZJ8	451 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	AAMDC	Q9H7C9	122 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF355P	Q9NSJ1	428 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	MRPL27	Q9P0M9	148 aa	Known RBP	5.09	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF492	Q9P255	531 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	CTSZ	Q9UBR2	303 aa		5.09	□□□□□ -1.59
FN1-223	ENST00000490833	TANC2	Q9HCD6	1990 aa		5.09	□□□□□ -1.6
FN1-223	ENST00000490833	DSCAML1	Q8TD84	2053 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	HCFC1	P51610	2035 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	IGKV1OR2-108	A0A075B7D4	117 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833		A0A1W2PPI3	338 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833		M0QZK8	103 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	ZNF253	O75346	499 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	FOXH1	O75593	365 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	TOMM40	O96008	361 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	SOD3	P08294	240 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	EFNA4	P52798	201 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	RAB4B	P61018	213 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	EBI3	Q14213	229 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	SAPCD1	Q5SSQ6	148 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	BAGE3	Q86Y29	109 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	TTC9C	Q8N5M4	171 aa		5.08	□□□□□ -1.6

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