RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	CD7	P09564	240 aa		13.97	□□□□□ -0.17
C4A-256	ENST00000490663	SPANXN5	Q5MJ07	72 aa		13.97	□□□□□ -0.17
C4A-256	ENST00000490663	TECR	Q9NZ01	308 aa	Known RBP	13.97	□□□□□ -0.17
C4A-256	ENST00000490663	TENM3	Q9P273	2699 aa		13.97	□□□□□ -0.17
C4A-256	ENST00000490663	CCNK	O75909	580 aa		13.96	□□□□□ -0.17
C4A-256	ENST00000490663	IGLC1	P0CG04	106 aa		13.96	□□□□□ -0.17
C4A-256	ENST00000490663	SLC25A4	P12235	298 aa		13.96	□□□□□ -0.17
C4A-256	ENST00000490663	OR10J1	P30954	320 aa		13.96	□□□□□ -0.17
C4A-256	ENST00000490663	CD81	P60033	236 aa		13.96	□□□□□ -0.17
C4A-256	ENST00000490663	ID3	Q02535	119 aa		13.96	□□□□□ -0.17
C4A-256	ENST00000490663	OR2K2	Q8NGT1	345 aa		13.96	□□□□□ -0.17
C4A-256	ENST00000490663	RCL1	Q9Y2P8	373 aa	Known RBP	13.96	□□□□□ -0.17
C4A-256	ENST00000490663	IGKV3-7	A0A075B6H7	116 aa		13.95	□□□□□ -0.18
C4A-256	ENST00000490663	IGHV7-4-1	A0A0J9YVY3	117 aa		13.95	□□□□□ -0.18
C4A-256	ENST00000490663	C5orf51	A6NDU8	294 aa		13.95	□□□□□ -0.18
C4A-256	ENST00000490663	NOXA1	Q86UR1	476 aa		13.95	□□□□□ -0.18
C4A-256	ENST00000490663	MARC2	Q969Z3	335 aa		13.95	□□□□□ -0.18
C4A-256	ENST00000490663	B9D2	Q9BPU9	175 aa		13.95	□□□□□ -0.18
C4A-256	ENST00000490663	SMPX	Q9UHP9	88 aa		13.95	□□□□□ -0.18
C4A-256	ENST00000490663		K7EMT4	169 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	FRMD6-AS1	P0C7T7	363 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	IGHV4-30-4	P0DP06	118 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	PAX9	P55771	341 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	DEFA1	P59665	94 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	DEFA3	P59666	94 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	RAB11A	P62491	216 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	GAMT	Q14353	236 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	ETFRF1	Q6IPR1	90 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	GTSCR1	Q86UQ5	136 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	TMEM116	Q8NCL8	245 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	ST8SIA2	Q92186	375 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	SLC35E1	Q96K37	410 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	CIB3	Q96Q77	187 aa	Predicted RBP	13.94	□□□□□ -0.18
C4A-256	ENST00000490663	RNF2	Q99496	336 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	NEURL2	Q9BR09	285 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	RHPN1-AS1	Q9BWJ2	59 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	PSENEN	Q9NZ42	101 aa		13.94	□□□□□ -0.18
C4A-256	ENST00000490663	LSM5	Q9Y4Y9	91 aa	Known RBP	13.94	□□□□□ -0.18
C4A-256	ENST00000490663	PRSS46	E5RG02	174 aa		13.93	□□□□□ -0.18
C4A-256	ENST00000490663	INMT-MINDY4	F8WBC2	141 aa		13.93	□□□□□ -0.18
C4A-256	ENST00000490663	CHEK1	O14757	476 aa		13.93	□□□□□ -0.18
C4A-256	ENST00000490663	MBP	P02686	304 aa	Predicted RBP	13.93	□□□□□ -0.18
C4A-256	ENST00000490663	IL5	P05113	134 aa		13.93	□□□□□ -0.18
C4A-256	ENST00000490663	OR8G2P	Q6IF36	304 aa		13.93	□□□□□ -0.18
C4A-256	ENST00000490663	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.93	□□□□□ -0.18
C4A-256	ENST00000490663	LILRB2	Q8N423	598 aa		13.93	□□□□□ -0.18
C4A-256	ENST00000490663	OR1S2	Q8NGQ3	325 aa		13.93	□□□□□ -0.18
C4A-256	ENST00000490663	STRAP	Q9Y3F4	350 aa	Known RBP	13.93	□□□□□ -0.18
C4A-256	ENST00000490663	TRAV14DV4	A0A0A6YYC5	116 aa		13.92	□□□□□ -0.18
C4A-256	ENST00000490663	SIX6	O95475	246 aa		13.92	□□□□□ -0.18
C4A-256	ENST00000490663	DCTN2	Q13561	401 aa	Known RBP	13.92	□□□□□ -0.18
C4A-256	ENST00000490663	DEFB125	Q8N687	156 aa		13.92	□□□□□ -0.18
C4A-256	ENST00000490663	GINS3	Q9BRX5	216 aa		13.92	□□□□□ -0.18
C4A-256	ENST00000490663	UBQLN2	Q9UHD9	624 aa		13.92	□□□□□ -0.18
C4A-256	ENST00000490663	IGKV1D-37	A0A075B6S9	117 aa		13.91	□□□□□ -0.18
C4A-256	ENST00000490663	TRAV30	A0A087WSZ9	112 aa		13.91	□□□□□ -0.18
C4A-256	ENST00000490663	METTL15P1	P0C7V9	234 aa		13.91	□□□□□ -0.18
C4A-256	ENST00000490663	TFPI2	P48307	235 aa		13.91	□□□□□ -0.18
C4A-256	ENST00000490663	ZNF90	Q03938	601 aa		13.91	□□□□□ -0.18
C4A-256	ENST00000490663	OR2F1	Q13607	317 aa		13.91	□□□□□ -0.18
C4A-256	ENST00000490663	GBGT1	Q8N5D6	347 aa		13.91	□□□□□ -0.18
C4A-256	ENST00000490663	IGKV1OR2-108	A0A075B7D4	117 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	ZFP92	A6NM28	416 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663		K7EPK0	472 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	GOSR2	O14653	212 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	SCGB2A1	O75556	95 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	IL4	P05112	153 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	GPX4	P36969	197 aa	Predicted RBP	13.9	□□□□□ -0.18
C4A-256	ENST00000490663	S100A10	P60903	97 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	RRAS2	P62070	204 aa	Predicted RBP	13.9	□□□□□ -0.18
C4A-256	ENST00000490663	USF2	Q15853	346 aa	Predicted RBP	13.9	□□□□□ -0.18
C4A-256	ENST00000490663	GSG1L	Q6UXU4	331 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	ACOT7L	Q6ZUV0	252 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	SBSPON	Q8IVN8	264 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	SMIM8	Q96KF7	97 aa		13.9	□□□□□ -0.18
C4A-256	ENST00000490663	GPN1	Q9HCN4	374 aa	Predicted RBP	13.9	□□□□□ -0.18
C4A-256	ENST00000490663	SMCO3	A2RU48	225 aa		13.89	□□□□□ -0.19
C4A-256	ENST00000490663	PMS2P5	A8MQ11	134 aa		13.89	□□□□□ -0.19
C4A-256	ENST00000490663	TOMM40	O96008	361 aa		13.89	□□□□□ -0.19
C4A-256	ENST00000490663	PSG1	P11464	419 aa		13.89	□□□□□ -0.19
C4A-256	ENST00000490663	ATP5I	P56385	69 aa	Predicted RBP	13.89	□□□□□ -0.19
C4A-256	ENST00000490663	RPP30	P78346	268 aa	Known RBP	13.89	□□□□□ -0.19
C4A-256	ENST00000490663	TCF24	Q7RTU0	167 aa		13.89	□□□□□ -0.19
C4A-256	ENST00000490663	C2orf50	Q96LR7	162 aa		13.89	□□□□□ -0.19
C4A-256	ENST00000490663	MARVELD1	Q9BSK0	173 aa		13.89	□□□□□ -0.19
C4A-256	ENST00000490663	NBEAL2	Q6ZNJ1	2754 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	TRAV25	A0A0B4J276	109 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	C7orf66	A4D0T2	115 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	OR11H12	B2RN74	326 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	DFFB	O76075	338 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	YPEL3	P61236	119 aa	Predicted RBP	13.88	□□□□□ -0.19
C4A-256	ENST00000490663	AKR1C1	Q04828	323 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	OR51G1	Q8NGK1	321 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663		Q8WTZ3	238 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	METTL26	Q96S19	204 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	PBDC1	Q9BVG4	233 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	VSIR	Q9H7M9	311 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	TUBA4B	Q9H853	241 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	SRD5A3	Q9H8P0	318 aa		13.88	□□□□□ -0.19
C4A-256	ENST00000490663	C19orf73	Q9NVV2	129 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms