RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ULBP3Q9BZM4 244 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 C1orf198Q9H425 327 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 MAP1LC3AQ9H492 121 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 PLEKHF2Q9H8W4 249 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 ST20Q9HBF5 79 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 RDH14Q9HBH5 336 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 HES4Q9HCC6 221 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 SLC39A9Q9NUM3 307 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM106BQ9NUM4 274 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM38BQ9NVV0 291 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 MRPL27Q9P0M9 148 aaKnown RBP1.5□□□□□ -2.17
HMGN1-218ENST00000490032 MRM2Q9UI43 246 aaKnown RBP1.5□□□□□ -2.17
HMGN1-218ENST00000490032 HSPB8Q9UJY1 196 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF257Q9Y2Q1 563 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 MCM3APO60318 1980 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 ECM29Q5VYK3 1845 aa1.5□□□□□ -2.17
HMGN1-218ENST00000490032 LAMB4A4D0S4 1761 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 NCOR1O75376 2440 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TRAV1-1A0A0B4J248 108 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TRAV25A0A0B4J276 109 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 IGHV2OR16-5A0A0B4J2B6 119 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MDFIC2A0A1B0GVS7 189 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 A0A1W2PRD5 423 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 A0A1W2PRF3 423 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 A0A1W2PRM7 423 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 IGSF23A1L1A6 192 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MBLAC1A4D2B0 266 aaPredicted RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OR51F1A6NGY5 319 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM212A6NML5 194 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 F5H5K5 113 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 H3BRM9 83 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 J3QLW9 94 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF593O00488 134 aaPredicted RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 GEMIN2O14893 280 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RAB29O14966 203 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 GNG7O60262 68 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 FCMRO60667 390 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BKO60814 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 UPK3AO75631 287 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SNCGO76070 127 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 S1PR2O95136 353 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM50AO95807 157 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 CA2P00918 260 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 PTHP01270 115 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 FGF1P05230 155 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ATP5G1P05496 136 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BJP06899 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SOD3P08294 240 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SCGB1C2P0DMR2 95 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ATP1B2P14415 290 aaPredicted RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H1CP16403 213 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BOP23527 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 CRYBB3P26998 211 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BBP33778 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 G6PCP35575 357 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 PPICP45877 212 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 CSN1S1P47710 185 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ATP5G3P48201 142 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MARCKSL1P49006 195 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 CRYBA4P53673 196 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ATP1B3P54709 279 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 CAV3P56539 151 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RAB38P57729 211 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MLF1P58340 268 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MTPNP58546 118 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BDP58876 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BCP62807 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RPS24P62847 133 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RBX1P62877 108 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ARG2P78540 354 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 BTG2P78543 158 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RHOGP84095 191 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HOXC5Q00444 222 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 FABP5Q01469 135 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ATP5G2Q06055 141 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 Q0VG73 95 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TCP10Q12799 353 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SKP2Q13309 424 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RGNQ15493 299 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST2H2BEQ16778 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RTL8BQ17RB0 113 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HLA-DRB5Q30154 266 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 CCSMST1Q4G0I0 132 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SPATA45Q537H7 98 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 LDLRAD2Q5SZI1 272 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 C12orf73Q69YU5 71 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 APOBEC3HQ6NTF7 200 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SBSNQ6UWP8 590 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 Q6ZS92 163 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OLIG3Q7RTU3 272 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 S100A7AQ86SG5 101 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF676Q8N7Q3 588 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 FER1L6-AS1Q8NA97 138 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OR2Z1Q8NG97 314 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OR4X2Q8NGF9 303 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OR2K2Q8NGT1 345 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OR6N2Q8NGY6 317 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 FNDC9Q8TBE3 224 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RPS4Y2Q8TD47 263 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms