RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TNFAIP8L2Q6P589 184 aaPredicted RBP0.61□□□□□ -2.31
CCDC39-206ENST00000489868 DCUN1D2Q6PH85 259 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 HIST2H3AQ71DI3 136 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 ANGPTL5Q86XS5 388 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 LRRC18Q8N456 261 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 ZNF439Q8NDP4 499 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 ST6GALNAC3Q8NDV1 305 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 OR9Q1Q8NGQ5 310 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 MCFD2Q8NI22 146 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 ACOT12Q8WYK0 555 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 BORCS7Q96B45 105 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 DCUN1D1Q96GG9 259 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 DIRAS2Q96HU8 199 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 GPER1Q99527 375 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 VPS25Q9BRG1 176 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 TCEAL7Q9BRU2 100 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 ULBP3Q9BZM4 244 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 FAM96AQ9H5X1 160 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 TPT1P8Q9HAU6 139 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 LRTM1Q9HBL6 345 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 SPANXA1Q9NS26 97 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 RASL12Q9NYN1 266 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 IDI2-AS1Q9NZ38 188 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 PYCARDQ9ULZ3 195 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 POLR1DQ9Y2S0 133 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 SOGA1O94964 1423 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 PTPRGP23470 1445 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 CNTLNQ9NXG0 1405 aa0.61□□□□□ -2.31
CCDC39-206ENST00000489868 PCF11O94913 1555 aaKnown RBP0.61□□□□□ -2.31
CCDC39-206ENST00000489868 PBRM1Q86U86 1689 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 FAM236DA0A1B0GTK5 79 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 A0A1B0GV50 99 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 A0A1W2PRE2 83 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 MAP1LC3B2A6NCE7 125 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 ARL5CA6NH57 179 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 EEF1E1-BLOC1S5C9J1V9 151 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 E7EQ34 232 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 G3V2T6 193 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 K7ERU9 68 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 FAAHO00519 579 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 HMGB3O15347 200 aaKnown RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 CYB5BO43169 146 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 DLEU1O43261 78 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 MFSD11O43934 449 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 TPST1O60507 370 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 BANF1O75531 89 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 IFNA10P01566 189 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 IFNGP01579 166 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 TTRP02766 147 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 IFNA4P05014 189 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 S100A8P05109 93 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 REG1AP05451 166 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 IL3P08700 152 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 HTR1AP08908 422 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OR5G3P0C626 314 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 FAM236CP0DP71 79 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 RNASE3P12724 160 aaKnown RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 CYBAP13498 195 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 SDC4P31431 198 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 PHBP35232 272 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 GLRXP35754 106 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 MAP2K4P45985 399 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 REG1BP48304 166 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 MARCKSL1P49006 195 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 AKR1D1P51857 326 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 PIGPP57054 158 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 GNG2P59768 71 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 DNAJB13P59910 316 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 CKS1BP61024 79 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 HSPE1P61604 102 aaKnown RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 GNG5P63218 68 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 RUNX1Q01196 453 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 BATFQ16520 125 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 ACOT6Q3I5F7 207 aaPredicted RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 C10orf55Q5SWW7 151 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 AKR1C8PQ5T2L2 129 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 C9orf64Q5T6V5 341 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM78Q5T7P6 136 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 TEX36Q5VZQ5 186 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 SFXN4Q6P4A7 337 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 TOMM20LQ6UXN7 152 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OOSP2Q86WS3 158 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 C1orf158Q8N1D5 194 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 FAM19A2Q8N3H0 131 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 FAM24BQ8N5W8 94 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM86BQ8N661 226 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OR52L1Q8NGH7 329 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OR4D11Q8NGI4 311 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OR51A2Q8NGJ7 313 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OR4K15Q8NH41 348 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 C1orf54Q8WWF1 131 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM203Q969S6 136 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 C14orf144Q96I85 54 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 CCDC115Q96NT0 180 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 OR52E6Q96RD3 313 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 SERPINI1Q99574 410 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 EFCAB11Q9BUY7 163 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 PBDC1Q9BVG4 233 aa0.6□□□□□ -2.31
CCDC39-206ENST00000489868 GGACTQ9BVM4 153 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms