RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 S100ZQ8WXG8 99 aa14.29□□□□□ -0.12
EPHB4-207ENST00000489808 NPIPB3Q92617 1050 aa14.29□□□□□ -0.12
EPHB4-207ENST00000489808 SRD5A3Q9H8P0 318 aa14.29□□□□□ -0.12
EPHB4-207ENST00000489808 IGHV3OR16-13A0A075B7E8 117 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 IGHV3-74A0A0B4J1X5 117 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 MED6O75586 246 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 ADAP1O75689 374 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 APOHP02749 345 aaPredicted RBP14.28□□□□□ -0.12
EPHB4-207ENST00000489808 IFNA4P05014 189 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 IGLC1P0CG04 106 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 FAM90A2PQ658T7 463 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 VSIRQ9H7M9 311 aa14.28□□□□□ -0.12
EPHB4-207ENST00000489808 IAPPP10997 89 aa14.27□□□□□ -0.13
EPHB4-207ENST00000489808 NPPCP23582 126 aa14.27□□□□□ -0.13
EPHB4-207ENST00000489808 OR10J1P30954 320 aa14.27□□□□□ -0.13
EPHB4-207ENST00000489808 GPX4P36969 197 aaPredicted RBP14.27□□□□□ -0.13
EPHB4-207ENST00000489808 YPEL3P61236 119 aaPredicted RBP14.27□□□□□ -0.13
EPHB4-207ENST00000489808 LILRB2Q8N423 598 aa14.27□□□□□ -0.13
EPHB4-207ENST00000489808 Q8WTZ3 238 aa14.27□□□□□ -0.13
EPHB4-207ENST00000489808 ACY3Q96HD9 319 aa14.27□□□□□ -0.13
EPHB4-207ENST00000489808 OR4C46A6NHA9 309 aa14.26□□□□□ -0.13
EPHB4-207ENST00000489808 SYNGR2O43760 224 aa14.26□□□□□ -0.13
EPHB4-207ENST00000489808 IFNA21P01568 189 aa14.26□□□□□ -0.13
EPHB4-207ENST00000489808 TCRBP04435 133 aa14.26□□□□□ -0.13
EPHB4-207ENST00000489808 BMI1P35226 326 aa14.26□□□□□ -0.13
EPHB4-207ENST00000489808 ST8SIA2Q92186 375 aa14.26□□□□□ -0.13
EPHB4-207ENST00000489808 CIB3Q96Q77 187 aaPredicted RBP14.26□□□□□ -0.13
EPHB4-207ENST00000489808 MAGT1Q9H0U3 335 aa14.26□□□□□ -0.13
EPHB4-207ENST00000489808 MPTX1A8MV57 137 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 CD5P06127 495 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 RAB11AP62491 216 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 ID3Q02535 119 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 TCF24Q7RTU0 167 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 MITD1Q8WV92 249 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 CITED4Q96RK1 184 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 METTL26Q96S19 204 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 SPATA25Q9BR10 227 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 C20orf85Q9H1P6 137 aa14.25□□□□□ -0.13
EPHB4-207ENST00000489808 IGHV3-66A0A0C4DH42 116 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 A0A1W2PS18 150 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 WRBO00258 174 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 DFFBO76075 338 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 CRYBB3P26998 211 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 RPP30P78346 268 aaKnown RBP14.24□□□□□ -0.13
EPHB4-207ENST00000489808 GAMTQ14353 236 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 PTTG2Q9NZH5 202 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 UBQLN2Q9UHD9 624 aa14.24□□□□□ -0.13
EPHB4-207ENST00000489808 IGKV3-7A0A075B6H7 116 aa14.23□□□□□ -0.13
EPHB4-207ENST00000489808 RD3LP0DJH9 198 aa14.23□□□□□ -0.13
EPHB4-207ENST00000489808 OR4D5Q8NGN0 318 aa14.23□□□□□ -0.13
EPHB4-207ENST00000489808 FAM110AQ9BQ89 295 aa14.23□□□□□ -0.13
EPHB4-207ENST00000489808 TMEM231Q9H6L2 316 aa14.23□□□□□ -0.13
EPHB4-207ENST00000489808 PAIP2BQ9ULR5 123 aaKnown RBP14.23□□□□□ -0.13
EPHB4-207ENST00000489808 TRAV6A0A075B6T7 132 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 TFPI2P48307 235 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 CMC4P56277 68 aaPredicted RBP14.22□□□□□ -0.13
EPHB4-207ENST00000489808 PAFAH1B2P68402 229 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 ODF3L2Q3SX64 289 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 GBGT1Q8N5D6 347 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 BATF3Q9NR55 127 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 TBC1D24Q9ULP9 559 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 U3KQE9 123 aa14.22□□□□□ -0.13
EPHB4-207ENST00000489808 LOC102724200A0A096LPH7 203 aaPredicted RBP14.21□□□□□ -0.13
EPHB4-207ENST00000489808 FAM240BA0A1B0GVZ2 78 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 TOMM40O96008 361 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 PSG1P11464 419 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 NKX2-1P43699 371 aaPredicted RBP14.21□□□□□ -0.13
EPHB4-207ENST00000489808 POLR2GP62487 172 aaKnown RBP eCLIP14.21□□□□□ -0.13
EPHB4-207ENST00000489808 ZNF846Q147U1 533 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 SPANXN5Q5MJ07 72 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 NARS2Q96I59 477 aaKnown RBP14.21□□□□□ -0.13
EPHB4-207ENST00000489808 SLC35E1Q96K37 410 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 GGTLC1Q9BX51 225 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 WDR12Q9GZL7 423 aaKnown RBP14.21□□□□□ -0.13
EPHB4-207ENST00000489808 NUDT15Q9NV35 164 aa14.21□□□□□ -0.13
EPHB4-207ENST00000489808 STAB2Q8WWQ8 2551 aa14.2□□□□□ -0.14
EPHB4-207ENST00000489808 H2AFB2P0C5Z0 115 aa14.2□□□□□ -0.14
EPHB4-207ENST00000489808 RPL11P62913 178 aaKnown RBP14.2□□□□□ -0.14
EPHB4-207ENST00000489808 ASAH1Q13510 395 aa14.2□□□□□ -0.14
EPHB4-207ENST00000489808 MZT2BQ6NZ67 158 aa14.2□□□□□ -0.14
EPHB4-207ENST00000489808 WFDC3Q8IUB2 231 aa14.2□□□□□ -0.14
EPHB4-207ENST00000489808 MS4A6AQ9H2W1 248 aa14.2□□□□□ -0.14
EPHB4-207ENST00000489808 IGKV1D-37A0A075B6S9 117 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 ZFP92A6NM28 416 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 PRSS46E5RG02 174 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 DNASE2O00115 360 aaPredicted RBP14.19□□□□□ -0.14
EPHB4-207ENST00000489808 UPK1BO75841 260 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 IL4P05112 153 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 HNRNPCP07910 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
EPHB4-207ENST00000489808 P2RY1P47900 373 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 USF2Q15853 346 aaPredicted RBP14.19□□□□□ -0.14
EPHB4-207ENST00000489808 IAH1Q2TAA2 248 aaPredicted RBP14.19□□□□□ -0.14
EPHB4-207ENST00000489808 ZNF431Q8TF32 576 aaPredicted RBP14.19□□□□□ -0.14
EPHB4-207ENST00000489808 SEC22CQ9BRL7 303 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 RETNQ9HD89 108 aa14.19□□□□□ -0.14
EPHB4-207ENST00000489808 STRAPQ9Y3F4 350 aaKnown RBP14.19□□□□□ -0.14
EPHB4-207ENST00000489808 TENM3Q9P273 2699 aa14.18□□□□□ -0.14
EPHB4-207ENST00000489808 TRAV2A0A0B4J234 112 aa14.18□□□□□ -0.14
EPHB4-207ENST00000489808 ZNF90Q03938 601 aa14.18□□□□□ -0.14
EPHB4-207ENST00000489808 ZBTB8BQ8NAP8 495 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms