RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RHEBQ15382 184 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 RRN3P1Q2M238 152 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 ZNF826PQ6ZT77 177 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 COA5Q86WW8 74 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 STAG3L4Q8TBR4 150 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 SLAMF6Q96DU3 332 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 HIST1H2BLQ99880 126 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 YIPF3Q9GZM5 350 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 IMUPQ9GZP8 106 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 SH3BGRL3Q9H299 93 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 UFC1Q9Y3C8 167 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 MED1Q15648 1581 aaPredicted RBP1.74□□□□□ -2.13
XRN1-213ENST00000489241 MFSD11O43934 449 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 NDUFC2O95298 119 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 FABP1P07148 127 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 UBBP0CG47 229 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 Q1T7F1 81 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 AKR1C8PQ5T2L2 129 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 MBD3L1Q8WWY6 194 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 AQP3Q92482 292 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 ZNF625Q96I27 306 aaPredicted RBP1.74□□□□□ -2.13
XRN1-213ENST00000489241 BOLA2Q9H3K6 86 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 LYRM2Q9NU23 88 aaPredicted RBP1.74□□□□□ -2.13
XRN1-213ENST00000489241 EPDR1Q9UM22 224 aa1.74□□□□□ -2.13
XRN1-213ENST00000489241 PCNX2A6NKB5 2137 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 NUMA1Q14980 2115 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 GLI3P10071 1580 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 SCN10AQ9Y5Y9 1956 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 MEIKINA0A087WXM9 373 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 TMEM212A6NML5 194 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 H7C1C5 153 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 PHBP35232 272 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 LCN6P62502 163 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 ELOBQ15370 118 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 TSNQ15631 228 aaKnown RBP1.73□□□□□ -2.13
XRN1-213ENST00000489241 TRIQKQ629K1 86 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 OR13D1Q8NGV5 346 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 MIXL1Q9H2W2 232 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 TRABDQ9H4I3 376 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 SSR3Q9UNL2 185 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 RGS12O14924 1447 aa1.73□□□□□ -2.13
XRN1-213ENST00000489241 ROCK1Q13464 1354 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 TAX1BP3O14907 124 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 BANF1O75531 89 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 GPX1P07203 203 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 AKR1C3P42330 323 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 EIF5AP63241 154 aaKnown RBP1.72□□□□□ -2.13
XRN1-213ENST00000489241 ZNF846Q147U1 533 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 C3orf33Q6P1S2 294 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 FP248Q71RG6 208 aaPredicted RBP1.72□□□□□ -2.13
XRN1-213ENST00000489241 C10orf126Q8N4M7 172 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 OR4D11Q8NGI4 311 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 SERPINI1Q99574 410 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 ACER3Q9NUN7 267 aa1.72□□□□□ -2.13
XRN1-213ENST00000489241 MDC1Q14676 2089 aaKnown RBP1.71□□□□□ -2.13
XRN1-213ENST00000489241 ZNF106Q9H2Y7 1883 aaKnown RBP1.71□□□□□ -2.14
XRN1-213ENST00000489241 PTPRBP23467 1997 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 C7orf71A4D174 169 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 M0R378 163 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 AIPO00170 330 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 PGRMC1O00264 195 aaKnown RBP1.71□□□□□ -2.14
XRN1-213ENST00000489241 CST8O60676 142 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 CRPP02741 224 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 ZNF705BP0CI00 300 aaPredicted RBP1.71□□□□□ -2.14
XRN1-213ENST00000489241 SRP14P37108 136 aaKnown RBP1.71□□□□□ -2.14
XRN1-213ENST00000489241 B2MP61769 119 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 Q96M85 177 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 LYSMD1Q96S90 227 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 SELENOSQ9BQE4 189 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 SLC50A1Q9BRV3 221 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 BIN3Q9NQY0 253 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 V9GYQ6 96 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 SETD5Q9C0A6 1442 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 HEATR5AQ86XA9 2040 aa1.71□□□□□ -2.14
XRN1-213ENST00000489241 KIF1BO60333 1816 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
XRN1-213ENST00000489241 TRAV1-1A0A0B4J248 108 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 OR2T1O43869 369 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 SERPINB1P30740 379 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 TCTAP57738 103 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 SNCBQ16143 134 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 GRINAQ7Z429 371 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 OR10J5Q8NHC4 309 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 PBDC1Q9BVG4 233 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 TMEM126AQ9H061 195 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 PCBD2Q9H0N5 130 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 TAS2R4Q9NYW5 299 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 ATPIF1Q9UII2 106 aa1.7□□□□□ -2.14
XRN1-213ENST00000489241 DUXBA0A1W2PPF3 345 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 RIIAD1A6NNX1 92 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 ASAH2BP0C7U1 165 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 DYNLT1P63172 113 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 SPANXN5Q5MJ07 72 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 BRMS1LQ5PSV4 323 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 BCL2L15Q5TBC7 163 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 STX19Q8N4C7 294 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 LINC00471Q8N535 108 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 C3orf56Q8N813 242 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 ZHX1-C8orf76Q96EF9 292 aa1.69□□□□□ -2.14
XRN1-213ENST00000489241 PRADC1Q9BSG0 188 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms