RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 RALGAPA2Q2PPJ7 1873 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 NUP210LQ5VU65 1888 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 NLRC5Q86WI3 1866 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 CEP170Q5SW79 1584 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 QRICH2Q9H0J4 1663 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 TRAV27A0A087WT01 109 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 A0A087X0T9 212 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 IGHV1-45A0A0A0MS14 117 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 IGHV1-58A0A0C4DH39 117 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 IGKV1-12A0A0C4DH73 117 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 IRGMA1A4Y4 181 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 ZNF860A6NHJ4 632 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 TMEM256-PLSCR3K7ERE1 68 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 ZNF861PO60384 105 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 NAPSAO96009 420 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 KRASP01116 189 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 IGKV1D-12P01611 117 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 PRB2P02812 416 aaPredicted RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 SRP19P09132 144 aaKnown RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 CXCL1P09341 107 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 SPINK8P0C7L1 97 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 FABP2P12104 132 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 ZNF93P35789 620 aaPredicted RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 TGFBR1P36897 503 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 FOXA1P55317 472 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 BTG2P78543 158 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 HOXC5Q00444 222 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 IL17AQ16552 155 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 LAIR2Q6ISS4 152 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 RPS19BP1Q86WX3 136 aaKnown RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 TTC9CQ8N5M4 171 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 PACRGLQ8N7B6 248 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 SUMF2Q8NBJ7 301 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 OR10AC1Q8NH08 325 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 OR4K13Q8NH42 304 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 STAG3L4Q8TBR4 150 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 TMEM158Q8WZ71 300 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 RNASE6Q93091 150 aaKnown RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 SLC25A46Q96AG3 418 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 CIB3Q96Q77 187 aaPredicted RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 MIEN1Q9BRT3 115 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 SNRNP25Q9BV90 132 aaKnown RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 TSSK6Q9BXA6 273 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 TUBA4BQ9H853 241 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 RPRMQ9NS64 109 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 MED9Q9NWA0 146 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 CCDC167Q9P0B6 97 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 COMMD3Q9UBI1 195 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 ZNF443Q9Y2A4 671 aaPredicted RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 IER3IP1Q9Y5U9 82 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.07□□□□□ -2.08
RBM28-207ENST00000488249 PSME4Q14997 1843 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 KIAA1671Q9BY89 1806 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 ANKRD31Q8N7Z5 1873 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 TEX14Q8IWB6 1497 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 TRIP11Q15643 1979 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 DOCK4Q8N1I0 1966 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 FANCMQ8IYD8 2048 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 MEGF6O75095 1541 aa2.07□□□□□ -2.08
RBM28-207ENST00000488249 ATG2BQ96BY7 2078 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 SMARCA4P51532 1647 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 IGHV3-74A0A0B4J1X5 117 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 TRAV13-1A0A0B4J241 112 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 IGKV1-6A0A0C4DH72 117 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 A0A0J9YXY3 114 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 PINLYPA6NC86 204 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 ZNF727A8MUV8 499 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 BUB1B-PAK6H3BSN5 160 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 M0R129 80 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 CST7O76096 145 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 TNFP01375 233 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 IGKV1-39P01597 117 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 IGKV1D-39P04432 117 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 CTSDP07339 412 aaPredicted RBP2.06□□□□□ -2.08
RBM28-207ENST00000488249 GZMBP10144 247 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 LGALS3P17931 250 aaKnown RBP2.06□□□□□ -2.08
RBM28-207ENST00000488249 MDKP21741 143 aaPredicted RBP2.06□□□□□ -2.08
RBM28-207ENST00000488249 HIST1H2BOP23527 126 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 CRYBB3P26998 211 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 HIST1H2BBP33778 126 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 AQP4P55087 323 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 HIST1H2BDP58876 126 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 TMEM258P61165 79 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 HIST1H2BCP62807 126 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 UBA52P62987 128 aaKnown RBP2.06□□□□□ -2.08
RBM28-207ENST00000488249 QRFPP83859 136 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 HIST2H2BEQ16778 126 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 TMEM183BQ1AE95 376 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.06□□□□□ -2.08
RBM28-207ENST00000488249 FAM74A1Q5RGS3 127 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 C6orf52Q5T4I8 152 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 C22orf39Q6P5X5 142 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 PDPNQ86YL7 162 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 LINC00311Q8N616 119 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 WFDC11Q8NEX6 87 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 OR8D4Q8NGM9 314 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 OR5H2Q8NGV7 314 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 C7orf33Q8WU49 177 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 C15orf40Q8WUR7 153 aa2.06□□□□□ -2.08
RBM28-207ENST00000488249 HIST1H2BHQ93079 126 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms