RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 IGKCP01834 107 aa12.73□□□□□ -0.37
PKD1-220ENST00000487932 PINLYPA6NC86 204 aa12.73□□□□□ -0.37
PKD1-220ENST00000487932 C15orf61A6NNL5 157 aa12.73□□□□□ -0.37
PKD1-220ENST00000487932 CMC4P56277 68 aaPredicted RBP12.73□□□□□ -0.37
PKD1-220ENST00000487932 SLC25A39Q9BZJ4 359 aaPredicted RBP12.73□□□□□ -0.37
PKD1-220ENST00000487932 TRAV13-1A0A0B4J241 112 aa12.73□□□□□ -0.37
PKD1-220ENST00000487932 IGFL4Q6B9Z1 124 aa12.73□□□□□ -0.37
PKD1-220ENST00000487932 MRAPQ8TCY5 172 aa12.73□□□□□ -0.37
PKD1-220ENST00000487932 LSM4Q9Y4Z0 139 aaKnown RBP12.73□□□□□ -0.37
PKD1-220ENST00000487932 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 NCR2O95944 276 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 ERCC8Q13216 396 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 FAM90A1Q86YD7 464 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 EFNA4P52798 201 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 RNF223E7ERA6 249 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 IGHV2-26A0A0B4J1V2 119 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
PKD1-220ENST00000487932 ATXN8Q156A1 80 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 F5H768 121 aa12.72□□□□□ -0.37
PKD1-220ENST00000487932 PQLC2LA1A4F0 135 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 FOCADQ5VW36 1801 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 B4DSR2 109 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 IFITM3Q01628 133 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 YPEL1O60688 119 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 ORMDL2Q53FV1 153 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
PKD1-220ENST00000487932 C1QTNF9P0C862 333 aa12.71□□□□□ -0.38
PKD1-220ENST00000487932 IGLV3-21P80748 117 aaPredicted RBP12.71□□□□□ -0.38
PKD1-220ENST00000487932 BCORQ6W2J9 1755 aa12.71□□□□□ -0.38
PKD1-220ENST00000487932 ANXA2RQ3ZCQ2 193 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 ORAOV1Q8WV07 137 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 TM2D1Q9BX74 207 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 TMEM144Q7Z5S9 345 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 RTBDNQ9BSG5 229 aaPredicted RBP12.7□□□□□ -0.38
PKD1-220ENST00000487932 C10orf55Q5SWW7 151 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 EXOC3-AS1Q8N2X6 119 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 RNF114Q9Y508 228 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 ATP5L2Q7Z4Y8 100 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 GTF3AQ92664 365 aaKnown RBP12.7□□□□□ -0.38
PKD1-220ENST00000487932 LY6HO94772 140 aa12.7□□□□□ -0.38
PKD1-220ENST00000487932 SP5Q6BEB4 398 aaPredicted RBP12.7□□□□□ -0.38
PKD1-220ENST00000487932 MBNL3Q9NUK0 354 aaKnown RBP12.7□□□□□ -0.38
PKD1-220ENST00000487932 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
PKD1-220ENST00000487932 PMS2P5A8MQ11 134 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
PKD1-220ENST00000487932 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 COL18A1P39060 1754 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 SERF1AO75920 110 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 KLF17Q5JT82 389 aaPredicted RBP12.69□□□□□ -0.38
PKD1-220ENST00000487932 TMEM200BQ69YZ2 307 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 IGKV1D-13A0A0B4J2D9 117 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 ITGB1BP1O14713 200 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 EREGO14944 169 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 IGKV1-13P0DP09 117 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 DTX1Q86Y01 620 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 ZNF525Q8N782 197 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 MTCL1Q9Y4B5 1905 aaKnown RBP12.69□□□□□ -0.38
PKD1-220ENST00000487932 GREM1O60565 184 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 SELLP14151 372 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 ZNF114Q8NC26 417 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 TEX43Q6ZNM6 134 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 WBP1Q96G27 269 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 TMEM126AQ9H061 195 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 ARHGEF17Q96PE2 2063 aaPredicted RBP12.69□□□□□ -0.38
PKD1-220ENST00000487932 PRTN3P24158 256 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 HOXD3P31249 432 aaPredicted RBP12.69□□□□□ -0.38
PKD1-220ENST00000487932 LAGE3Q14657 143 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 SS18Q15532 418 aa12.69□□□□□ -0.38
PKD1-220ENST00000487932 DMRTC2Q8IXT2 367 aaPredicted RBP12.69□□□□□ -0.38
PKD1-220ENST00000487932 LRP5O75197 1615 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 ZNF497Q6ZNH5 498 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
PKD1-220ENST00000487932 SCRT1Q9BWW7 348 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 TCRAP04437 139 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 PCP4P48539 62 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 PRCDQ00LT1 54 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 C1QL4Q86Z23 238 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 ANAPC13Q9BS18 74 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 A0A087WWL8 130 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 TEX38Q6PEX7 206 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 C5orf30Q96GV9 206 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 NRN1Q9NPD7 142 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
PKD1-220ENST00000487932 UCP1P25874 307 aa12.68□□□□□ -0.38
PKD1-220ENST00000487932 GAGE2EQ4V326 116 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 GAGE2DQ9UEU5 116 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 WISP3O95389 354 aaPredicted RBP12.67□□□□□ -0.38
PKD1-220ENST00000487932 SRP19P09132 144 aaKnown RBP12.67□□□□□ -0.38
PKD1-220ENST00000487932 LINC01356Q8N9X3 169 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 RUSC1-AS1Q66K80 236 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 ZNF561-AS1K7EIQ3 104 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 LGALS1P09382 135 aaKnown RBP12.67□□□□□ -0.38
PKD1-220ENST00000487932 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 TPTE2P1Q5T6R2 138 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 RASL10AQ92737 203 aa12.67□□□□□ -0.38
PKD1-220ENST00000487932 F8VVB4 439 aa12.66□□□□□ -0.38
PKD1-220ENST00000487932 F8VWA3 439 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms