RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 TUBA4BQ9H853 241 aa12.75□□□□□ -0.37
HMG20B-212ENST00000487894 TRAV30A0A087WSZ9 112 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 SCGB2A1O75556 95 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 TCRBP04435 133 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 LAMTOR1Q6IAA8 161 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 ETFRF1Q6IPR1 90 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 LINC00322Q6ZN03 302 aaPredicted RBP12.74□□□□□ -0.37
HMG20B-212ENST00000487894 MAGT1Q9H0U3 335 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 SRD5A3Q9H8P0 318 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 TBC1D24Q9ULP9 559 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 NBEAL2Q6ZNJ1 2754 aa12.74□□□□□ -0.37
HMG20B-212ENST00000487894 IGHV3OR16-13A0A075B7E8 117 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 IGHV3-74A0A0B4J1X5 117 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 A6NJY4 79 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 SYNGR2O43760 224 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 MED6O75586 246 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 APOHP02749 345 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-212ENST00000487894 OR10J1P30954 320 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 ATP5IP56385 69 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-212ENST00000487894 HAGHQ16775 308 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 OR1S2Q8NGQ3 325 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 RCHY1Q96PM5 261 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 VSIRQ9H7M9 311 aa12.73□□□□□ -0.37
HMG20B-212ENST00000487894 TRAV6A0A075B6T7 132 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 IFNA4P05014 189 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 OR4D5Q8NGN0 318 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 MITD1Q8WV92 249 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 NPIPB3Q92617 1050 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 ACY3Q96HD9 319 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 WWC2-AS2Q96NR7 200 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
HMG20B-212ENST00000487894 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 BATF3Q9NR55 127 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 NUDT15Q9NV35 164 aa12.72□□□□□ -0.37
HMG20B-212ENST00000487894 RBMY1BA6NDE4 496 aaKnown RBP12.71□□□□□ -0.37
HMG20B-212ENST00000487894 RBMY1EA6NEQ0 496 aaKnown RBP12.71□□□□□ -0.37
HMG20B-212ENST00000487894 WRBO00258 174 aa12.71□□□□□ -0.37
HMG20B-212ENST00000487894 IFNA21P01568 189 aa12.71□□□□□ -0.37
HMG20B-212ENST00000487894 RBMY1DP0C7P1 496 aaKnown RBP12.71□□□□□ -0.37
HMG20B-212ENST00000487894 YPEL3P61236 119 aaPredicted RBP12.71□□□□□ -0.37
HMG20B-212ENST00000487894 ASAH1Q13510 395 aa12.71□□□□□ -0.37
HMG20B-212ENST00000487894 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
HMG20B-212ENST00000487894 ODF3L2Q3SX64 289 aa12.71□□□□□ -0.37
HMG20B-212ENST00000487894 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
HMG20B-212ENST00000487894 CIB3Q96Q77 187 aaPredicted RBP12.71□□□□□ -0.37
HMG20B-212ENST00000487894 KMT2CQ8NEZ4 4911 aaKnown RBP12.71□□□□□ -0.38
HMG20B-212ENST00000487894 OR4C46A6NHA9 309 aa12.7□□□□□ -0.38
HMG20B-212ENST00000487894 GPX4P36969 197 aaPredicted RBP12.7□□□□□ -0.38
HMG20B-212ENST00000487894 ID3Q02535 119 aa12.7□□□□□ -0.38
HMG20B-212ENST00000487894 LILRB2Q8N423 598 aa12.7□□□□□ -0.38
HMG20B-212ENST00000487894 UBQLN2Q9UHD9 624 aa12.7□□□□□ -0.38
HMG20B-212ENST00000487894 IGHV3-66A0A0C4DH42 116 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 FAM240BA0A1B0GVZ2 78 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 UPK1BO75841 260 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 NPPCP23582 126 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 CRYBB3P26998 211 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 BMI1P35226 326 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 POLR2GP62487 172 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMG20B-212ENST00000487894 RAB11AP62491 216 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 GAMTQ14353 236 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 TCF24Q7RTU0 167 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 METTL26Q96S19 204 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 SEC22CQ9BRL7 303 aa12.69□□□□□ -0.38
HMG20B-212ENST00000487894 IGKV3-7A0A075B6H7 116 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 IGKV1D-37A0A075B6S9 117 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 H3BP45 60 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 TOMM40O96008 361 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 NKX2-1P43699 371 aaPredicted RBP12.68□□□□□ -0.38
HMG20B-212ENST00000487894 IFITM3Q01628 133 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 USF2Q15853 346 aaPredicted RBP12.68□□□□□ -0.38
HMG20B-212ENST00000487894 IAH1Q2TAA2 248 aaPredicted RBP12.68□□□□□ -0.38
HMG20B-212ENST00000487894 MZT2BQ6NZ67 158 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 ZBTB8BQ8NAP8 495 aaPredicted RBP12.68□□□□□ -0.38
HMG20B-212ENST00000487894 Q8WTZ3 238 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 TMEM231Q9H6L2 316 aa12.68□□□□□ -0.38
HMG20B-212ENST00000487894 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
HMG20B-212ENST00000487894 CCSO14618 274 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 DFFBO76075 338 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 IL4P05112 153 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 CD5P06127 495 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 TFPI2P48307 235 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 RPP30P78346 268 aaKnown RBP12.67□□□□□ -0.38
HMG20B-212ENST00000487894 SPANXN5Q5MJ07 72 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 ZNF431Q8TF32 576 aaPredicted RBP12.67□□□□□ -0.38
HMG20B-212ENST00000487894 FAM110AQ9BQ89 295 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 U3KQE9 123 aa12.67□□□□□ -0.38
HMG20B-212ENST00000487894 A0A1W2PS18 150 aa12.66□□□□□ -0.38
HMG20B-212ENST00000487894 SSSCA1O60232 199 aa12.66□□□□□ -0.38
HMG20B-212ENST00000487894 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
HMG20B-212ENST00000487894 PSG1P11464 419 aa12.66□□□□□ -0.38
HMG20B-212ENST00000487894 P2RY1P47900 373 aa12.66□□□□□ -0.38
HMG20B-212ENST00000487894 GBGT1Q8N5D6 347 aa12.66□□□□□ -0.38
HMG20B-212ENST00000487894 RETNQ9HD89 108 aa12.66□□□□□ -0.38
HMG20B-212ENST00000487894 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms