RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 DOCK3Q8IZD9 2030 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MRPL30Q8TCC3 161 aaKnown RBP0□□□□□ -2.41
SMC4-219ENST00000487747 C10orf82Q8WW14 230 aa0□□□□□ -2.41
SMC4-219ENST00000487747 NEO1Q92859 1461 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MT1LQ93083 61 aa0□□□□□ -2.41
SMC4-219ENST00000487747 PLEKHB2Q96CS7 222 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ALPK3Q96L96 1907 aa0□□□□□ -2.41
SMC4-219ENST00000487747 KDM5DQ9BY66 1539 aa0□□□□□ -2.41
SMC4-219ENST00000487747 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
SMC4-219ENST00000487747 UACAQ9BZF9 1416 aa0□□□□□ -2.41
SMC4-219ENST00000487747 UPF3BQ9BZI7 483 aaKnown RBP0□□□□□ -2.41
SMC4-219ENST00000487747 TMEM133Q9H2Q1 129 aa0□□□□□ -2.41
SMC4-219ENST00000487747 LRTM1Q9HBL6 345 aa0□□□□□ -2.41
SMC4-219ENST00000487747 DUOX2Q9NRD8 1548 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ARHGAP35Q9NRY4 1499 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CDK12Q9NYV4 1490 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 TMEM2Q9UHN6 1383 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CASP8AP2Q9UKL3 1982 aa0□□□□□ -2.41
SMC4-219ENST00000487747 FBXO5Q9UKT4 447 aa0□□□□□ -2.41
SMC4-219ENST00000487747 NRXN1Q9ULB1 1477 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MED23Q9ULK4 1368 aa0□□□□□ -2.41
SMC4-219ENST00000487747 SHANK2Q9UPX8 1470 aa0□□□□□ -2.41
SMC4-219ENST00000487747 WDR7Q9Y4E6 1490 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CEP170BQ9Y4F5 1589 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 NCOA3Q9Y6Q9 1424 aa0□□□□□ -2.41
SMC4-219ENST00000487747 SETBP1Q9Y6X0 1596 aa0□□□□□ -2.41
SMC4-219ENST00000487747 FSIP2Q5CZC0 6907 aa-0□□□□□ -2.41
SMC4-219ENST00000487747 SYNE2Q8WXH0 6885 aaKnown RBP-0□□□□□ -2.41
SMC4-219ENST00000487747 MACF1Q9UPN3 7388 aaKnown RBP-0□□□□□ -2.41
SMC4-219ENST00000487747 SBF1O95248 1867 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 COL4A6Q14031 1691 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SYNJ1O43426 1573 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 KDM5CP41229 1560 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ADAMTS12P58397 1594 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ARHGEF5Q12774 1597 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ERCC6L2Q5T890 1561 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CDC42BPGQ6DT37 1551 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PEG3Q9GZU2 1588 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MAST1Q9Y2H9 1570 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MAPKBP1O60336 1514 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CUX1P39880 1505 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MAGI3Q5TCQ9 1506 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 EFCAB6Q5THR3 1501 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ZMYM4Q5VZL5 1548 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ZFYVE16Q7Z3T8 1539 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 LMTK2Q8IWU2 1503 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 EHBP1L1Q8N3D4 1523 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ABCA10Q8WWZ4 1543 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 LRRC7Q96NW7 1537 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 DLC1Q96QB1 1528 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SYCP2Q9BX26 1530 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ARHGEF12Q9NZN5 1544 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CCDC88BA6NC98 1476 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 FANCAO15360 1455 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ATP10BO94823 1461 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PZPP20742 1482 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ERVK-7P63135 1459 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 GOLGA3Q08378 1498 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CAMSAP2Q08AD1 1489 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 GRIN2AQ12879 1464 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 TCOF1Q13428 1488 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ABCC10Q5T3U5 1492 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CCDC141Q6ZP82 1450 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MLH3Q9UHC1 1453 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 OVOS2A0A0G2JMS6 1433 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 OVOS2A0A0J9YW53 1432 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ABCC5O15440 1437 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 OVOS2Q6IE36 1432 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 EDC4Q6P2E9 1401 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PPIP5K1Q6PFW1 1433 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 CD109Q6YHK3 1445 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ANKARQ7Z5J8 1434 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 VPS8Q8N3P4 1428 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PRG4Q92954 1404 aaPredicted RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 SCAPERQ9BY12 1400 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 RRBP1Q9P2E9 1410 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ANKRD50Q9ULJ7 1429 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ADCY9O60503 1353 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ROCK2O75116 1388 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ROCK1Q13464 1354 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 KTN1Q86UP2 1357 aaKnown RBP-0.01□□□□□ -2.41
SMC4-219ENST00000487747 ANKRD36BQ8N2N9 1353 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PLIN4Q96Q06 1357 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 MAP3K5Q99683 1374 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 A0A096LNT2 108 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 TRAV1-1A0A0B4J248 108 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 TRAV26-2A0A0B4J265 109 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 LOC107986453A0A1B0GWG9 222 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 FAM92AA1XBS5 289 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 LINC01546A6NGU7 62 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 B4DSR2 109 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 C5orf67F2Z3F1 127 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 H0YAA0 97 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 M0QX08 132 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 FAAHO00519 579 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 NDUFA2O43678 99 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 YPEL1O60688 119 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 PIAS1O75925 651 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 LYPLA2O95372 231 aa-0.01□□□□□ -2.41
SMC4-219ENST00000487747 IGF2P01344 180 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms