RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CCDC160A6NGH7 325 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 C1orf196B1AJZ1 125 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 GOLGA6L19H0YKK7 550 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 OR2B3O76000 313 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 TTRP02766 147 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 SERPINA6P08185 405 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 DEFA3P59666 94 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 IMPG1Q17R60 797 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 SPRNQ5BIV9 151 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 TEX261Q6UWH6 196 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 TRAPPC6BQ86SZ2 158 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 CLECL1Q8IZS7 167 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 KRT222Q8N1A0 295 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 Q8N6K4 173 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 C3orf56Q8N813 242 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 OR10J5Q8NHC4 309 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 WFDC5Q8TCV5 224 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 C20orf27Q9GZN8 174 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 DCSTAMPQ9H295 470 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 UBAP1Q9NZ09 502 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 EPDR1Q9UM22 224 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 CYSLTR1Q9Y271 337 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 SLC35A3Q9Y2D2 325 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 U3KQ87 197 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 V9GYY5 206 aaPredicted RBP0.41□□□□□ -2.34
CCDC66-221ENST00000487739 KIAA1549Q9HCM3 1950 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 SCN8AQ9UQD0 1980 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 ADGRB2O60241 1585 aa0.4□□□□□ -2.34
CCDC66-221ENST00000487739 SNRNP200O75643 2136 aaKnown RBP0.4□□□□□ -2.35
CCDC66-221ENST00000487739 ZNF736B4DX44 427 aaPredicted RBP0.4□□□□□ -2.35
CCDC66-221ENST00000487739 INE1O15225 51 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 PROSCO94903 275 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 RBP1P09455 135 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 OR4E1P0C645 316 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 BRMS1LQ5PSV4 323 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 CCDC42Q96M95 316 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 AMELYQ99218 206 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 CCDC90BQ9GZT6 254 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 RASL12Q9NYN1 266 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 HS3ST2Q9Y278 367 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 ARHGEF28Q8N1W1 1705 aaKnown RBP0.4□□□□□ -2.35
CCDC66-221ENST00000487739 KIF1BO60333 1816 aa0.4□□□□□ -2.35
CCDC66-221ENST00000487739 A0A087X0T9 212 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 DNAL4O96015 105 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 RPS17P08708 135 aaKnown RBP0.39□□□□□ -2.35
CCDC66-221ENST00000487739 SMIM17P0DL12 118 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 ESRGQ1W209 222 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 PTRHD1Q6GMV3 140 aaKnown RBP0.39□□□□□ -2.35
CCDC66-221ENST00000487739 SOSTDC1Q6X4U4 206 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 TRAPPC5Q8IUR0 188 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 SBSPONQ8IVN8 264 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 LINC00301Q8NCQ3 95 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 OR8D4Q8NGM9 314 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 BORCS5Q969J3 196 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 ADAT3Q96EY9 351 aaPredicted RBP0.39□□□□□ -2.35
CCDC66-221ENST00000487739 RNASE7Q9H1E1 156 aaKnown RBP0.39□□□□□ -2.35
CCDC66-221ENST00000487739 HEATR1Q9H583 2144 aaKnown RBP0.39□□□□□ -2.35
CCDC66-221ENST00000487739 C14orf105Q9NVL8 296 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 UTP11Q9Y3A2 253 aaKnown RBP0.39□□□□□ -2.35
CCDC66-221ENST00000487739 ADCY9O60503 1353 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 KMT2DO14686 5537 aa0.39□□□□□ -2.35
CCDC66-221ENST00000487739 CHD3Q12873 2000 aaKnown RBP0.38□□□□□ -2.35
CCDC66-221ENST00000487739 COL1A1P02452 1464 aaPredicted RBP0.38□□□□□ -2.35
CCDC66-221ENST00000487739 hCG_1818297A0A087WSY0 165 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 A0A087WUJ7 227 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 hADV38S2A0JD32 116 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 A8MT66 165 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 KPNA3O00505 521 aaPredicted RBP0.38□□□□□ -2.35
CCDC66-221ENST00000487739 NIPSNAP2O75323 286 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 ZNF682O95780 498 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 CASP1P29466 404 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 YPEL3P61236 119 aaPredicted RBP0.38□□□□□ -2.35
CCDC66-221ENST00000487739 MPV17LQ2QL34 196 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 C12orf74Q32Q52 190 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 C12orf45Q8N5I9 185 aaPredicted RBP0.38□□□□□ -2.35
CCDC66-221ENST00000487739 GDPD1Q8N9F7 314 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 SLC25A40Q8TBP6 338 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 CT55Q8WUE5 264 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 HIST1H2BLQ99880 126 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 CMSS1Q9BQ75 279 aaKnown RBP0.38□□□□□ -2.35
CCDC66-221ENST00000487739 C6orf62Q9GZU0 229 aaPredicted RBP0.38□□□□□ -2.35
CCDC66-221ENST00000487739 UCK1Q9HA47 277 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 RIMBP3CA6NJZ7 1639 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 RIMBP3BA6NNM3 1639 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 RIMBP3Q9UFD9 1639 aa0.38□□□□□ -2.35
CCDC66-221ENST00000487739 CNTRLQ7Z7A1 2325 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 SIP14410 1827 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 SMIM9A6NGZ8 99 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 SMIM23A6NLE4 172 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 CLDN25C9JDP6 229 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 NCR3O14931 201 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 SRIP30626 198 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 OMPP47874 163 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 RHOBP62745 196 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 RANP62826 216 aaKnown RBP0.37□□□□□ -2.35
CCDC66-221ENST00000487739 AESQ08117 197 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 ITGB3BPQ13352 177 aaPredicted RBP0.37□□□□□ -2.35
CCDC66-221ENST00000487739 TSNQ15631 228 aaKnown RBP0.37□□□□□ -2.35
CCDC66-221ENST00000487739 LCA10Q71F78 164 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 ARL5BQ96KC2 179 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 701 ms