RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 TRAV25A0A0B4J276 109 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 SSSCA1O60232 199 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 CLN5O75503 358 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 TMEM50AO95807 157 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 IFNA4P05014 189 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 C8orf88P0DMB2 117 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 POLR2GP62487 172 aaKnown RBP eCLIP9.23□□□□□ -0.93
SFXN3-206ENST00000487721 RAB11AP62491 216 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 ADAMTSL5Q6ZMM2 481 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 ZNF600Q6ZNG1 722 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 SLC16A13Q7RTY0 426 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 CACNG8Q8WXS5 425 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 TUBA4BQ9H853 241 aa9.23□□□□□ -0.93
SFXN3-206ENST00000487721 LSM5Q9Y4Y9 91 aaKnown RBP9.23□□□□□ -0.93
SFXN3-206ENST00000487721 TRAV14DV4A0A0A6YYC5 116 aa9.22□□□□□ -0.93
SFXN3-206ENST00000487721 IZUMO1RA6ND01 250 aa9.22□□□□□ -0.93
SFXN3-206ENST00000487721 MBPP02686 304 aaPredicted RBP9.22□□□□□ -0.93
SFXN3-206ENST00000487721 H2BFSP57053 126 aa9.22□□□□□ -0.93
SFXN3-206ENST00000487721 S100A10P60903 97 aa9.22□□□□□ -0.93
SFXN3-206ENST00000487721 RRAS2P62070 204 aaPredicted RBP9.22□□□□□ -0.93
SFXN3-206ENST00000487721 BTNL8Q6UX41 500 aa9.22□□□□□ -0.93
SFXN3-206ENST00000487721 NMES1Q9C002 83 aa9.22□□□□□ -0.93
SFXN3-206ENST00000487721 MLXQ9UH92 298 aa9.22□□□□□ -0.93
SFXN3-206ENST00000487721 RCL1Q9Y2P8 373 aaKnown RBP9.22□□□□□ -0.93
SFXN3-206ENST00000487721 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.93
SFXN3-206ENST00000487721 K7EPK0 472 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 CD5P06127 495 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 CXCL3P19876 107 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 CD81P60033 236 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 RAB32Q13637 225 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 FCN2Q15485 313 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 TMEM116Q8NCL8 245 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 NARS2Q96I59 477 aaKnown RBP9.21□□□□□ -0.94
SFXN3-206ENST00000487721 NEURL2Q9BR09 285 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 FNDC4Q9H6D8 234 aaPredicted RBP9.21□□□□□ -0.94
SFXN3-206ENST00000487721 TMEM231Q9H6L2 316 aa9.21□□□□□ -0.94
SFXN3-206ENST00000487721 PAIP2BQ9ULR5 123 aaKnown RBP9.21□□□□□ -0.94
SFXN3-206ENST00000487721 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 IGHV7-4-1A0A0J9YVY3 117 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 ZNF785A8K8V0 405 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 H3BP45 60 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 ZNF207O43670 478 aaKnown RBP9.2□□□□□ -0.94
SFXN3-206ENST00000487721 IGHV4-30-4P0DP06 118 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 EDN2P20800 178 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 GPX4P36969 197 aaPredicted RBP9.2□□□□□ -0.94
SFXN3-206ENST00000487721 RND2P52198 227 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 CYCSP99999 105 aaKnown RBP9.2□□□□□ -0.94
SFXN3-206ENST00000487721 IL15RAQ13261 267 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 MLANAQ16655 118 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 LRRC37A5PQ49AS3 106 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 PRSS54Q6PEW0 395 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 TOMM20LQ6UXN7 152 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 TMEM61Q8N0U2 210 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 Q8N1Y9 231 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 OR11H7Q8NGC8 314 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 Q8WTZ3 238 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 TMEM170AQ8WVE7 144 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 WDR89Q96FK6 387 aaPredicted RBP9.2□□□□□ -0.94
SFXN3-206ENST00000487721 ACY3Q96HD9 319 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 SLC35E1Q96K37 410 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 SMIM8Q96KF7 97 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 RAB40CQ96S21 281 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 SPAG8Q99932 426 aaPredicted RBP9.2□□□□□ -0.94
SFXN3-206ENST00000487721 PSENENQ9NZ42 101 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 SMPXQ9UHP9 88 aa9.2□□□□□ -0.94
SFXN3-206ENST00000487721 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
SFXN3-206ENST00000487721 A0A1W2PS18 150 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 A8MZ25 164 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 L7N2F9 121 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 SCAF4O95104 1147 aaKnown RBP9.19□□□□□ -0.94
SFXN3-206ENST00000487721 FABP1P07148 127 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 FRMD6-AS1P0C7T7 363 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 PVALBP20472 110 aaPredicted RBP9.19□□□□□ -0.94
SFXN3-206ENST00000487721 NPPCP23582 126 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 OR10J1P30954 320 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 VAMP2P63027 116 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 PAFAH1B2P68402 229 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 SPANXN5Q5MJ07 72 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 Q6ZNX1 250 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 METTL26Q96S19 204 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 ASCL2Q99929 193 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 RHPN1-AS1Q9BWJ2 59 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 ZMAT4Q9H898 229 aa9.19□□□□□ -0.94
SFXN3-206ENST00000487721 STRAPQ9Y3F4 350 aaKnown RBP9.19□□□□□ -0.94
SFXN3-206ENST00000487721 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 OR4C46A6NHA9 309 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 OR11H12B2RN74 326 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 TSPAN4O14817 238 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 PAX9P55771 341 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 TAS2R30P59541 319 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 YPEL3P61236 119 aaPredicted RBP9.18□□□□□ -0.94
SFXN3-206ENST00000487721 TIGITQ495A1 244 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 PPP1R1CQ8WVI7 109 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 NPIPB3Q92617 1050 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 GRAMD2BQ96HH9 432 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 PFDN2Q9UHV9 154 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
SFXN3-206ENST00000487721 U3KQK5 164 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms