RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 EPDR1Q9UM22 224 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 V9GYY5 206 aaPredicted RBP0.39□□□□□ -2.35
USP34-216ENST00000487547 MCM3APO60318 1980 aa0.39□□□□□ -2.35
USP34-216ENST00000487547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.38□□□□□ -2.35
USP34-216ENST00000487547 PRH1P02810 166 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 OR4E1P0C645 316 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 YPEL3P61236 119 aaPredicted RBP0.38□□□□□ -2.35
USP34-216ENST00000487547 ACOT6Q3I5F7 207 aaPredicted RBP0.38□□□□□ -2.35
USP34-216ENST00000487547 BRMS1LQ5PSV4 323 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 FAM74A1Q5RGS3 127 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 LINC00301Q8NCQ3 95 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 TSPAN32Q96QS1 320 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 SMR3AQ99954 134 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 C20orf27Q9GZN8 174 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 KCPQ6ZWJ8 1503 aa0.38□□□□□ -2.35
USP34-216ENST00000487547 WRNQ14191 1432 aaPredicted RBP eCLIP0.38□□□□□ -2.35
USP34-216ENST00000487547 COL6A3P12111 3177 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 C7orf71A4D174 169 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 C1orf196B1AJZ1 125 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 CHP2O43745 196 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 OR2J2O76002 312 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 AHSA1O95433 338 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 RBP1P09455 135 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 SMIM10L2AP0DMW4 78 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 SMIM10L2BP0DMW5 78 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 CASP1P29466 404 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 NKX2-5P52952 324 aaPredicted RBP0.37□□□□□ -2.35
USP34-216ENST00000487547 RHOBP62745 196 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 ESRGQ1W209 222 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 SPRNQ5BIV9 151 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 DCSTAMPQ9H295 470 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 VPS29Q9UBQ0 182 aa0.37□□□□□ -2.35
USP34-216ENST00000487547 UTP11Q9Y3A2 253 aaKnown RBP0.37□□□□□ -2.35
USP34-216ENST00000487547 CEP192Q8TEP8 1941 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 ZFC3H1O60293 1989 aaKnown RBP0.36□□□□□ -2.35
USP34-216ENST00000487547 TRAV26-2A0A0B4J265 109 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 M0R036 132 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 CCL25O15444 150 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 IFNA16P05015 189 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 LINC01554Q52M75 96 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 LCA10Q71F78 164 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 C8orf76Q96K31 380 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 HIST1H2BLQ99880 126 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 NIT2Q9NQR4 276 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 MRPL27Q9P0M9 148 aaKnown RBP0.36□□□□□ -2.35
USP34-216ENST00000487547 CYSLTR1Q9Y271 337 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 MYO3BQ8WXR4 1341 aa0.36□□□□□ -2.35
USP34-216ENST00000487547 A0A087X0T9 212 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 FAM236DA0A1B0GTK5 79 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 OR2T8A6NH00 312 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 FAM236CP0DP71 79 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 ANP32AP39687 249 aaKnown RBP0.35□□□□□ -2.35
USP34-216ENST00000487547 LINC00322Q6ZN03 302 aaPredicted RBP0.35□□□□□ -2.35
USP34-216ENST00000487547 OR8D4Q8NGM9 314 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 CMSS1Q9BQ75 279 aaKnown RBP0.35□□□□□ -2.35
USP34-216ENST00000487547 C14orf132Q9NPU4 83 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 TMEM14CQ9P0S9 112 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 APCP25054 2843 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 SNAPC4Q5SXM2 1469 aa0.35□□□□□ -2.35
USP34-216ENST00000487547 SMIM23A6NLE4 172 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 CLDN24A6NM45 220 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 KLF7O75840 302 aaPredicted RBP0.34□□□□□ -2.36
USP34-216ENST00000487547 TTRP02766 147 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 SMIM17P0DL12 118 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 TSNQ15631 228 aaKnown RBP0.34□□□□□ -2.36
USP34-216ENST00000487547 CLDN22Q8N7P3 220 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 ST6GALNAC3Q8NDV1 305 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 PLPP5Q8NEB5 264 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 OR2T10Q8NGZ9 312 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 TMEM254Q8TBM7 123 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 TLNRD1Q9H1K6 362 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 BCL2L10Q9HD36 194 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 UBAP1Q9NZ09 502 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 NEO1Q92859 1461 aa0.34□□□□□ -2.36
USP34-216ENST00000487547 PKD1L2Q7Z442 2459 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 hCG_1818297A0A087WSY0 165 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 TRBV6-4A0A1B0GX49 114 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 A8MT66 165 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 CCL16O15467 120 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 GADD45GO95257 159 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 OR2T35Q8NGX2 323 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 WFDC5Q8TCV5 224 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 CT55Q8WUE5 264 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 TAS2R7Q9NYW3 318 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 FBXO5Q9UKT4 447 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 CACNA1AO00555 2505 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 SBF1O95248 1867 aa0.33□□□□□ -2.36
USP34-216ENST00000487547 TLCD2A6NGC4 264 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 CYB5BO43169 146 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 CNIH1O95406 144 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 SERPINE1P05121 402 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 SERPINA6P08185 405 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 OMPP47874 163 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 DEFA3P59666 94 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 TRAPPC5Q8IUR0 188 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 GDPD1Q8N9F7 314 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 FAM172AQ8WUF8 416 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 BORCS7Q96B45 105 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 SLAMF6Q96DU3 332 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 C2orf50Q96LR7 162 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms