RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 HOXA1P49639 335 aaPredicted RBP13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 TIGITQ495A1 244 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 LHFPL1Q86WI0 220 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 C1QTNF4Q9BXJ3 329 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 KRTAP4-5Q9BYR2 181 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 ENY2Q9NPA8 101 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 XCL2Q9UBD3 114 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 KLK11Q9UBX7 282 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 MTFP1Q9UDX5 166 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 C3orf85A0A1B0GTC6 90 aa13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 RPL5P46777 297 aaKnown RBP13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 EIF2B2P49770 351 aaKnown RBP13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 C16orf54Q6UWD8 224 aa13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 TERB2Q8NHR7 220 aa13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 GLMPQ8WWB7 406 aa13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 EXTL2Q9UBQ6 330 aa13.92□□□□□ -0.18
SMPDL3A-202ENST00000487215 MUC4Q99102 2169 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 IGLV2-18A0A075B6J9 118 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 IFNA10P01566 189 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 CD74P04233 296 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 CD3DP04234 171 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 TAS2R19P59542 299 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 NUTF2P61970 127 aaKnown RBP13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 TRIM16LQ309B1 348 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 RNASE12Q5GAN4 147 aaKnown RBP13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 Q6ZR54 194 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 ZNF575Q86XF7 245 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 OR52I2Q8NH67 350 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 TP53RKQ96S44 253 aa13.91□□□□□ -0.18
SMPDL3A-202ENST00000487215 H3BMM0 161 aa13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 GABARAPO95166 117 aa13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 HNRNPCP07910 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 PI3P19957 117 aa13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 SSBP1Q04837 148 aaKnown RBP13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 BSXQ3C1V8 233 aa13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 UBE2DNLQ8IWF7 75 aa13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 TMEM229BQ8NBD8 167 aa13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 RNASE11Q8TAA1 199 aaKnown RBP13.9□□□□□ -0.18
SMPDL3A-202ENST00000487215 TRAV30A0A087WSZ9 112 aa13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 FAM90A26D6RGX4 464 aa13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 AP2S1P53680 142 aaPredicted RBP13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 MRPS10P82664 201 aaKnown RBP13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 CTF1Q16619 201 aa13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 ZNF705AQ6ZN79 300 aaPredicted RBP13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 Q6ZRM9 215 aa13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 FAM219AQ8IW50 185 aa13.89□□□□□ -0.19
SMPDL3A-202ENST00000487215 HSPG2P98160 4391 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 A0A0G2JRQ6 117 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 RAB3DO95716 219 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 IFNA21P01568 189 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 IGLC1P0CG04 106 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 SPART-AS1P0CW21 52 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 UCP1P25874 307 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 SNRPD3P62318 126 aaKnown RBP13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 MEF2DQ14814 521 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 SCGB2B2Q4G0G5 96 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 ABHD1Q96SE0 405 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 NEU1Q99519 415 aa13.88□□□□□ -0.19
SMPDL3A-202ENST00000487215 ZNF705FA8MVS1 300 aaPredicted RBP13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 GABARAPH6UMI1 98 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 ZNF705DP0CH99 300 aaPredicted RBP13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 ZNF705BP0CI00 300 aaPredicted RBP13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 EMP1P54849 157 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 USF2Q15853 346 aaPredicted RBP13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 STEAP1BQ6NZ63 245 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 OR1S2Q8NGQ3 325 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 OR13C8Q8NGS7 320 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 Q8WTZ3 238 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 SEPSECSQ9HD40 501 aaKnown RBP13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 NRN1Q9NPD7 142 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 RABL2AQ9UBK7 228 aaPredicted RBP13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 RABL2BQ9UNT1 228 aa13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 C14orf166Q9Y224 244 aaKnown RBP13.87□□□□□ -0.19
SMPDL3A-202ENST00000487215 RPS10-NUDT3A0A1W2PQS6 291 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 HLA-DRB4P13762 266 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 RND2P52198 227 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 SPCS3P61009 180 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 DHODHQ02127 395 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 SP6Q3SY56 376 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 GPR107Q5VW38 600 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 PRSS54Q6PEW0 395 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 OR52E5Q8NH55 327 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 FAM210BQ96KR6 192 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 CACFD1Q9UGQ2 172 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 HLA-DRB4X5D2U9 266 aa13.86□□□□□ -0.19
SMPDL3A-202ENST00000487215 TMEM189A5PLL7 270 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 DISC1C4P0D8 188 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 RGS5O15539 181 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 IL4P05112 153 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 OR10J1P30954 320 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 HTR2BP41595 481 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 YPEL3P61236 119 aaPredicted RBP13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 SURF2Q15527 256 aaPredicted RBP13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 SOHLH1Q5JUK2 328 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 OR4D10Q8NGI6 311 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 MARCH1Q8TCQ1 289 aa13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 NAA50Q9GZZ1 169 aaKnown RBP13.85□□□□□ -0.19
SMPDL3A-202ENST00000487215 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms