RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 LOXL4Q96JB6 756 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 MBD3L4A6NDZ8 208 aaPredicted RBP9.86□□□□□ -0.83
COL3A1-206ENST00000487010 MBD3L3A6NE82 208 aaPredicted RBP9.86□□□□□ -0.83
COL3A1-206ENST00000487010 MBD3L5A6NJ08 208 aaPredicted RBP9.86□□□□□ -0.83
COL3A1-206ENST00000487010 IGLL1P15814 213 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 PTTG1IPP53801 180 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 GNG5P63218 68 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 THAP8Q8NA92 274 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 OR5AN1Q8NGI8 311 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 MBD3L2Q8NHZ7 208 aaPredicted RBP9.86□□□□□ -0.83
COL3A1-206ENST00000487010 EPDR1Q9UM22 224 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 LINC00312Q9Y6C7 94 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 CGB1A6NKQ9 187 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 TOMM40O96008 361 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 WT1-ASQ06250 92 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 C3orf36Q3SXR2 165 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 ZNF474Q6S9Z5 364 aaPredicted RBP9.85□□□□□ -0.83
COL3A1-206ENST00000487010 UNQ5815/PRO19632Q6UWF5 114 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 KIR3DL3Q8N743 410 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 OR4F17Q8NGA8 305 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 FLYWCH2Q96CP2 140 aaKnown RBP9.85□□□□□ -0.83
COL3A1-206ENST00000487010 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 COX11Q9Y6N1 276 aa9.85□□□□□ -0.83
COL3A1-206ENST00000487010 IGHV3-48P01763 117 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 SUB1P53999 127 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL3A1-206ENST00000487010 TEX36Q5VZQ5 186 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 LINC00305Q7Z4B0 112 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 SPATA12Q7Z6I5 190 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 RBMXL3Q8N7X1 1067 aaKnown RBP9.84□□□□□ -0.83
COL3A1-206ENST00000487010 OR4A5Q8NH83 315 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 TMEM167AQ8TBQ9 72 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 SMIM12Q96EX1 92 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 KLF12Q9Y4X4 402 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 NBEAQ8NFP9 2946 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 IGLC7A0M8Q6 106 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 SLC25A5P05141 298 aaKnown RBP9.84□□□□□ -0.83
COL3A1-206ENST00000487010 FAM162BQ5T6X4 162 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 Q6ZVH6 145 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 PDPNQ86YL7 162 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 MUC15Q8N387 334 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 ZNF738Q8NE65 137 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 ZNF596Q8TC21 504 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 GAL3ST2Q9H3Q3 398 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 MRPL36Q9P0J6 103 aaKnown RBP9.84□□□□□ -0.83
COL3A1-206ENST00000487010 DYSFO75923 2080 aa9.84□□□□□ -0.83
COL3A1-206ENST00000487010 CADP27708 2225 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 IGHV1-69-2A0A0G2JMI3 117 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 NKX6-3A6NJ46 265 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 PLAUP00749 431 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 WT1P19544 449 aaPredicted RBP9.83□□□□□ -0.84
COL3A1-206ENST00000487010 TNFSF4P23510 183 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 CA7P43166 264 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 HBBP68871 147 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 UBE2V1Q13404 147 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 C10orf55Q5SWW7 151 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 TCF24Q7RTU0 167 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 STXBP6Q8NFX7 210 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 OR2D3Q8NGH3 330 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 VSTM2AQ8TAG5 236 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 GPR82Q96P67 336 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 TMEM70Q9BUB7 260 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 RPP21Q9H633 154 aaKnown RBP9.83□□□□□ -0.84
COL3A1-206ENST00000487010 ASCL3Q9NQ33 180 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 CLEC5AQ9NY25 188 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 COL6A3P12111 3177 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 PGPA6NDG6 321 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 MOSP00540 346 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 REG1BP48304 166 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 LEMD1Q68G75 181 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 SSX8Q7RTT4 187 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 ZCCHC24Q8N2G6 241 aaKnown RBP9.83□□□□□ -0.84
COL3A1-206ENST00000487010 OR4C13Q8NGP0 309 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 BLNKQ8WV28 456 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 PERPQ96FX8 193 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 SGK494Q96LW2 274 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 PRSS22Q9GZN4 317 aa9.83□□□□□ -0.84
COL3A1-206ENST00000487010 MUC3AQ02505 3323 aa9.82□□□□□ -0.84
COL3A1-206ENST00000487010 CRXO43186 299 aaPredicted RBP9.82□□□□□ -0.84
COL3A1-206ENST00000487010 IGLV2-23P01705 113 aa9.82□□□□□ -0.84
COL3A1-206ENST00000487010 CCL3L1P16619 93 aa9.82□□□□□ -0.84
COL3A1-206ENST00000487010 MEF2CQ06413 473 aaPredicted RBP9.82□□□□□ -0.84
COL3A1-206ENST00000487010 LINC00322Q6ZN03 302 aaPredicted RBP9.82□□□□□ -0.84
COL3A1-206ENST00000487010 C1RLQ9NZP8 487 aa9.82□□□□□ -0.84
COL3A1-206ENST00000487010 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
COL3A1-206ENST00000487010 SH2D7A6NKC9 451 aaPredicted RBP9.81□□□□□ -0.84
COL3A1-206ENST00000487010 A8MWL6 223 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 M0R296 226 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 ORM2P19652 201 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 PCP4P48539 62 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 CT83Q5H943 113 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 PRR31Q5SQ13 230 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 CHCHD1Q96BP2 118 aaKnown RBP9.81□□□□□ -0.84
COL3A1-206ENST00000487010 SOX21Q9Y651 276 aaPredicted RBP9.81□□□□□ -0.84
COL3A1-206ENST00000487010 GPR179Q6PRD1 2367 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 C19orf71A6NCJ1 209 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 OR4C46A6NHA9 309 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 C22orf46C9J442 243 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms