RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 A8MTW9 85 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 H3BNG1 76 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 ZNF561-AS1K7EIQ3 104 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 M0QYG6 137 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 ZNF701M0R085 212 aaPredicted RBP5.53□□□□□ -1.52
XRN1-212ENST00000486211 DENRO43583 198 aaKnown RBP5.53□□□□□ -1.52
XRN1-212ENST00000486211 CTXN2P0C2S0 81 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 HIST1H1DP16402 221 aaKnown RBP5.53□□□□□ -1.52
XRN1-212ENST00000486211 MYL12AP19105 171 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 DTYMKP23919 212 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 RORCP51449 518 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
XRN1-212ENST00000486211 PAX9P55771 341 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 CLDN12P56749 244 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 OR5I1Q13606 314 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 C2orf76Q3KRA6 126 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 FAM78BQ5VT40 261 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 AMTNQ6UX39 209 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 CADM3Q8N126 398 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 OR13F1Q8NGS4 319 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 OR10R2Q8NGX6 335 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 NARS2Q96I59 477 aaKnown RBP5.53□□□□□ -1.52
XRN1-212ENST00000486211 IGF2BP2-AS1Q96M15 143 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 TMEM56Q96MV1 263 aa5.53□□□□□ -1.52
XRN1-212ENST00000486211 A0A075B6Q4 140 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 TMEM272A0A1B0GTI8 110 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 F6UB75 175 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 CRXO43186 299 aaPredicted RBP5.52□□□□□ -1.53
XRN1-212ENST00000486211 IGKV1-17P01599 117 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 FCGR1AP12314 374 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 RAB11BQ15907 218 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 PQLC1Q8N2U9 271 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 FAM3DQ96BQ1 224 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 TMEM208Q9BTX3 173 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 WDR12Q9GZL7 423 aaKnown RBP5.52□□□□□ -1.53
XRN1-212ENST00000486211 SCPEP1Q9HB40 452 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 PLGRKTQ9HBL7 147 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 ORC6Q9Y5N6 252 aa5.52□□□□□ -1.53
XRN1-212ENST00000486211 A0A096LPF7 62 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 SOCS3O14543 225 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 CLN5O75503 358 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 NXPH4O95158 308 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 HNRNPCP07910 306 aaKnown RBP eCLIP5.51□□□□□ -1.53
XRN1-212ENST00000486211 UCHL1P09936 223 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 TALDO1P37837 337 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 RPS19P39019 145 aaKnown RBP5.51□□□□□ -1.53
XRN1-212ENST00000486211 ERVK-16P61578 105 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 ST3GAL4Q11206 333 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 CATR1Q13166 79 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 HSD17B12Q53GQ0 312 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 LELP1Q5T871 98 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 SPATA31B1PQ5VZV4 182 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 CNIH2Q6PI25 160 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 SIGLEC15Q6ZMC9 328 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 SCXQ7RTU7 201 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 LINC00612Q8N6U2 182 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 ZBTB34Q8NCN2 500 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 OR51H1Q8NH63 302 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 SECTM1Q8WVN6 248 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 MSRB1Q9NZV6 116 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 PRNDQ9UKY0 176 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 RAB22AQ9UL26 194 aa5.51□□□□□ -1.53
XRN1-212ENST00000486211 A0A0J9YX75 114 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 IRGMA1A4Y4 181 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 RS1O15537 224 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 BUB3O43684 328 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 SNAPC5O75971 98 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 G6PCP35575 357 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 FHL2Q14192 279 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 TIGITQ495A1 244 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 Q8N814 137 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 LGALS14Q8TCE9 139 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 TMEM230Q96A57 120 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 SLC7A6OSQ96CW6 309 aaPredicted RBP5.5□□□□□ -1.53
XRN1-212ENST00000486211 TMEM80Q96HE8 168 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 VSIG2Q96IQ7 327 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 LINC00052Q96N35 136 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 ABHD1Q96SE0 405 aa5.5□□□□□ -1.53
XRN1-212ENST00000486211 ARGLU1Q9NWB6 273 aaPredicted RBP5.5□□□□□ -1.53
XRN1-212ENST00000486211 AK6Q9Y3D8 172 aaKnown RBP5.5□□□□□ -1.53
XRN1-212ENST00000486211 LOC100130705A0A1B0GUX0 176 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 EFCAB10A6NFE3 127 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 KRASP01116 189 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 ELK1P19419 428 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 GADD45AP24522 165 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 PSMB3P49720 205 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 PRCDQ00LT1 54 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 DNAL1Q4LDG9 190 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 ZNF818PQ6ZRF7 136 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 TPRA1Q86W33 373 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 MS4A15Q8N5U1 240 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 OR10J6PQ8NGY7 276 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 OR4X1Q8NH49 305 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 FCAMRQ8WWV6 532 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 DAZAP1Q96EP5 407 aaKnown RBP5.49□□□□□ -1.53
XRN1-212ENST00000486211 FAM212BQ9NTI7 297 aaPredicted RBP5.49□□□□□ -1.53
XRN1-212ENST00000486211 FKBP11Q9NYL4 201 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 ANXA10Q9UJ72 324 aa5.49□□□□□ -1.53
XRN1-212ENST00000486211 TIMM8BQ9Y5J9 83 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms