RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 TMEM116Q8NCL8 245 aa9.75□□□□□ -0.85
SSR4-211ENST00000486204 CIB3Q96Q77 187 aaPredicted RBP9.75□□□□□ -0.85
SSR4-211ENST00000486204 PRR25Q96S07 402 aa9.75□□□□□ -0.85
SSR4-211ENST00000486204 ZFAND3Q9H8U3 227 aa9.75□□□□□ -0.85
SSR4-211ENST00000486204 GPN1Q9HCN4 374 aaPredicted RBP9.75□□□□□ -0.85
SSR4-211ENST00000486204 IGHV3OR16-8A0A075B7F1 116 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 C7orf66A4D0T2 115 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 IZUMO1RA6ND01 250 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 SSSCA1O60232 199 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 SCGB1D2O95969 90 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 MBPP02686 304 aaPredicted RBP9.74□□□□□ -0.85
SSR4-211ENST00000486204 IGLC1P0CG04 106 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 RELQ04864 619 aaPredicted RBP9.74□□□□□ -0.85
SSR4-211ENST00000486204 C2orf50Q96LR7 162 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 C11orf1Q9H5F2 150 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 GSKIPQ9P0R6 139 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 MLXQ9UH92 298 aa9.74□□□□□ -0.85
SSR4-211ENST00000486204 PMS2P5A8MQ11 134 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 LY86O95711 162 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 IFNA4P05014 189 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 DEFB114Q30KQ6 69 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 ETFRF1Q6IPR1 90 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 ZNF600Q6ZNG1 722 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 OR2K2Q8NGT1 345 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 RCHY1Q96PM5 261 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 DAZ1Q9NQZ3 744 aaKnown RBP9.73□□□□□ -0.85
SSR4-211ENST00000486204 UFC1Q9Y3C8 167 aa9.73□□□□□ -0.85
SSR4-211ENST00000486204 TRAV30A0A087WSZ9 112 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 C5orf51A6NDU8 294 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 FAM25EA8MYX2 175 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 K7EMT4 169 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 K7EPK0 472 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
SSR4-211ENST00000486204 SCAF4O95104 1147 aaKnown RBP9.72□□□□□ -0.85
SSR4-211ENST00000486204 GP9P14770 177 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 GPX4P36969 197 aaPredicted RBP9.72□□□□□ -0.85
SSR4-211ENST00000486204 RAB11AP62491 216 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 GAMTQ14353 236 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 TIGITQ495A1 244 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 CD300EQ496F6 205 aaPredicted RBP9.72□□□□□ -0.85
SSR4-211ENST00000486204 SPANXN5Q5MJ07 72 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 TOMM20LQ6UXN7 152 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 TMEM14EPQ6UXP3 125 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 GSG1LQ6UXU4 331 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 DYNLRB2Q8TF09 96 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 NPIPB3Q92617 1050 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 MARC2Q969Z3 335 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 C20orf24Q9BUV8 137 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 PSENENQ9NZ42 101 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
SSR4-211ENST00000486204 STRAPQ9Y3F4 350 aaKnown RBP9.72□□□□□ -0.85
SSR4-211ENST00000486204 PUS1Q9Y606 427 aaKnown RBP eCLIP9.72□□□□□ -0.85
SSR4-211ENST00000486204 SELENOKQ9Y6D0 94 aa9.72□□□□□ -0.85
SSR4-211ENST00000486204 STAB2Q8WWQ8 2551 aa9.71□□□□□ -0.85
SSR4-211ENST00000486204 PCLOQ9Y6V0 5065 aa9.71□□□□□ -0.85
SSR4-211ENST00000486204 IGKV1D-37A0A075B6S9 117 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 GOSR2O14653 212 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 TSC22D2O75157 780 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 CCNKO75909 580 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 SIX6O95475 246 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 OR10J1P30954 320 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 TAS2R30P59541 319 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 LCN12Q6JVE5 192 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 BTNL8Q6UX41 500 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 TMEM61Q8N0U2 210 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 OR1S2Q8NGQ3 325 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 ACY3Q96HD9 319 aa9.71□□□□□ -0.86
SSR4-211ENST00000486204 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.86
SSR4-211ENST00000486204 IGKV1OR2-108A0A075B7D4 117 aa9.7□□□□□ -0.86
SSR4-211ENST00000486204 ZNF785A8K8V0 405 aa9.7□□□□□ -0.86
SSR4-211ENST00000486204 YPEL3P61236 119 aaPredicted RBP9.7□□□□□ -0.86
SSR4-211ENST00000486204 RPP30P78346 268 aaKnown RBP9.7□□□□□ -0.86
SSR4-211ENST00000486204 RAB32Q13637 225 aa9.7□□□□□ -0.86
SSR4-211ENST00000486204 SLC35E1Q96K37 410 aa9.7□□□□□ -0.86
SSR4-211ENST00000486204 PAIP2BQ9ULR5 123 aaKnown RBP9.7□□□□□ -0.86
SSR4-211ENST00000486204 LSM5Q9Y4Y9 91 aaKnown RBP9.7□□□□□ -0.86
SSR4-211ENST00000486204 ALG5Q9Y673 324 aa9.7□□□□□ -0.86
SSR4-211ENST00000486204 IGHV7-4-1A0A0J9YVY3 117 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 RBMY1BA6NDE4 496 aaKnown RBP9.69□□□□□ -0.86
SSR4-211ENST00000486204 RBMY1EA6NEQ0 496 aaKnown RBP9.69□□□□□ -0.86
SSR4-211ENST00000486204 YIF1AO95070 293 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 RBMY1DP0C7P1 496 aaKnown RBP9.69□□□□□ -0.86
SSR4-211ENST00000486204 METTL15P1P0C7V9 234 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 H2BFSP57053 126 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 ACOT7LQ6ZUV0 252 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 Q8N1Y9 231 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 THAP8Q8NA92 274 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 WDR89Q96FK6 387 aaPredicted RBP9.69□□□□□ -0.86
SSR4-211ENST00000486204 SMPXQ9UHP9 88 aa9.69□□□□□ -0.86
SSR4-211ENST00000486204 IGHV3-49A0A0A0MS15 119 aa9.68□□□□□ -0.86
SSR4-211ENST00000486204 CHEK1O14757 476 aa9.68□□□□□ -0.86
SSR4-211ENST00000486204 SCGB2A1O75556 95 aa9.68□□□□□ -0.86
SSR4-211ENST00000486204 TOMM40O96008 361 aa9.68□□□□□ -0.86
SSR4-211ENST00000486204 APOHP02749 345 aaPredicted RBP9.68□□□□□ -0.86
SSR4-211ENST00000486204 ARL16Q0P5N6 197 aa9.68□□□□□ -0.86
SSR4-211ENST00000486204 USF2Q15853 346 aaPredicted RBP9.68□□□□□ -0.86
SSR4-211ENST00000486204 GINS3Q9BRX5 216 aa9.68□□□□□ -0.86
SSR4-211ENST00000486204 NMES1Q9C002 83 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms