RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 BMI1P35226 326 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 ODF3L2Q3SX64 289 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 ACY3Q96HD9 319 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 FAM110AQ9BQ89 295 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 C7orf50Q9BRJ6 194 aaKnown RBP13.72□□□□□ -0.21
COL1A1-206ENST00000485870 TMED3Q9Y3Q3 217 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 IFNA4P05014 189 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 IGLC1P0CG04 106 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 SLC25A6P12236 298 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 GGNBP1Q5YKI7 109 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 TCF24Q7RTU0 167 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 LILRB2Q8N423 598 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 GBGT1Q8N5D6 347 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 OR1S2Q8NGQ3 325 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 NPIPB3Q92617 1050 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 GGTLC1Q9BX51 225 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 VSIRQ9H7M9 311 aa13.71□□□□□ -0.21
COL1A1-206ENST00000485870 LOC102724200A0A096LPH7 203 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-206ENST00000485870 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
COL1A1-206ENST00000485870 NPPCP23582 126 aa13.7□□□□□ -0.22
COL1A1-206ENST00000485870 FAM90A2PQ658T7 463 aa13.7□□□□□ -0.22
COL1A1-206ENST00000485870 MUC7Q8TAX7 377 aa13.7□□□□□ -0.22
COL1A1-206ENST00000485870 METTL26Q96S19 204 aa13.7□□□□□ -0.22
COL1A1-206ENST00000485870 MAGT1Q9H0U3 335 aa13.7□□□□□ -0.22
COL1A1-206ENST00000485870 ADAP1O75689 374 aa13.69□□□□□ -0.22
COL1A1-206ENST00000485870 DFFBO76075 338 aa13.69□□□□□ -0.22
COL1A1-206ENST00000485870 OR4E1P0C645 316 aa13.69□□□□□ -0.22
COL1A1-206ENST00000485870 DHRS2Q13268 280 aa13.69□□□□□ -0.22
COL1A1-206ENST00000485870 C4orf46Q504U0 113 aa13.69□□□□□ -0.22
COL1A1-206ENST00000485870 LYG2Q86SG7 212 aa13.69□□□□□ -0.22
COL1A1-206ENST00000485870 TMEM231Q9H6L2 316 aa13.69□□□□□ -0.22
COL1A1-206ENST00000485870 PAIP2BQ9ULR5 123 aaKnown RBP13.69□□□□□ -0.22
COL1A1-206ENST00000485870 FAM90A26D6RGX4 464 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 C3orf84H3BNL1 204 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 PLA2G10O15496 165 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 MED6O75586 246 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-206ENST00000485870 RPL11P62913 178 aaKnown RBP13.68□□□□□ -0.22
COL1A1-206ENST00000485870 WFDC3Q8IUB2 231 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 Q8WTZ3 238 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 EDA2RQ9HAV5 297 aa13.68□□□□□ -0.22
COL1A1-206ENST00000485870 A0A1W2PS18 150 aa13.67□□□□□ -0.22
COL1A1-206ENST00000485870 LYRM1O43325 122 aa13.67□□□□□ -0.22
COL1A1-206ENST00000485870 CD5P06127 495 aa13.67□□□□□ -0.22
COL1A1-206ENST00000485870 CRYBB3P26998 211 aa13.67□□□□□ -0.22
COL1A1-206ENST00000485870 ATP5IP56385 69 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-206ENST00000485870 PAFAH1B2P68402 229 aa13.67□□□□□ -0.22
COL1A1-206ENST00000485870 APRG1Q8IVJ8 170 aa13.67□□□□□ -0.22
COL1A1-206ENST00000485870 NARS2Q96I59 477 aaKnown RBP13.67□□□□□ -0.22
COL1A1-206ENST00000485870 MPTX1A8MV57 137 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 DNASE2O00115 360 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-206ENST00000485870 WRBO00258 174 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 SYNGR2O43760 224 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 IL4P05112 153 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 P2RY1P47900 373 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 RAB11AP62491 216 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 ZNF124Q15973 351 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 SLC35E1Q96K37 410 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 CIB3Q96Q77 187 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-206ENST00000485870 C20orf85Q9H1P6 137 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 MS4A6AQ9H2W1 248 aa13.66□□□□□ -0.22
COL1A1-206ENST00000485870 TOMM40O96008 361 aa13.65□□□□□ -0.22
COL1A1-206ENST00000485870 IFNA21P01568 189 aa13.65□□□□□ -0.22
COL1A1-206ENST00000485870 RD3LP0DJH9 198 aa13.65□□□□□ -0.22
COL1A1-206ENST00000485870 RPL35AP18077 110 aaKnown RBP13.65□□□□□ -0.22
COL1A1-206ENST00000485870 GPX4P36969 197 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-206ENST00000485870 GAMTQ14353 236 aa13.65□□□□□ -0.22
COL1A1-206ENST00000485870 CNPY1Q3B7I2 92 aa13.65□□□□□ -0.22
COL1A1-206ENST00000485870 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
COL1A1-206ENST00000485870 RABAC1Q9UI14 185 aa13.65□□□□□ -0.22
COL1A1-206ENST00000485870 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
COL1A1-206ENST00000485870 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL1A1-206ENST00000485870 LYL1P12980 280 aa13.64□□□□□ -0.23
COL1A1-206ENST00000485870 APOC4P55056 127 aa13.64□□□□□ -0.23
COL1A1-206ENST00000485870 CMC4P56277 68 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-206ENST00000485870 USF2Q15853 346 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-206ENST00000485870 STXBP6Q8NFX7 210 aa13.64□□□□□ -0.23
COL1A1-206ENST00000485870 GRAMD2BQ96HH9 432 aa13.64□□□□□ -0.23
COL1A1-206ENST00000485870 CCDC32Q9BV29 185 aa13.64□□□□□ -0.23
COL1A1-206ENST00000485870 A6NHS1 94 aa13.63□□□□□ -0.23
COL1A1-206ENST00000485870 H3BP45 60 aa13.63□□□□□ -0.23
COL1A1-206ENST00000485870 PSG1P11464 419 aa13.63□□□□□ -0.23
COL1A1-206ENST00000485870 RPP30P78346 268 aaKnown RBP13.63□□□□□ -0.23
COL1A1-206ENST00000485870 SPANXN5Q5MJ07 72 aa13.63□□□□□ -0.23
COL1A1-206ENST00000485870 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 TCRBP04435 133 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 POLR2GP62487 172 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL1A1-206ENST00000485870 ID3Q02535 119 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 CASC10Q5T4H9 136 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 ZFAND6Q6FIF0 208 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 FAM24BQ8N5W8 94 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 OR51G1Q8NGK1 321 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 OR4D5Q8NGN0 318 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 S100ZQ8WXG8 99 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 U3KQE9 123 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 STARD9Q9P2P6 4700 aa13.62□□□□□ -0.23
COL1A1-206ENST00000485870 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms