RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PRR20AP86496 221 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 RELQ04864 619 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-227ENST00000485102 TMEM187Q14656 261 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 TMEM116Q8NCL8 245 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 OR1P1Q8NH06 330 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 OR11H2Q8NH07 326 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 C2CD4CQ8TF44 421 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 SEC22AQ96IW7 307 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 MARVELD1Q9BSK0 173 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 HRH4Q9H3N8 390 aa9.53□□□□□ -0.88
HDAC6-227ENST00000485102 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-227ENST00000485102 A0A1B0GU03 582 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 C9orf170A2RU37 121 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 SNRPGP15A8MWD9 76 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 NUPL2O15504 423 aaKnown RBP9.52□□□□□ -0.89
HDAC6-227ENST00000485102 G6PCP35575 357 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 DHRS2Q13268 280 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 PPP1R1AQ13522 171 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 NOXA1Q86UR1 476 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 OR52E5Q8NH55 327 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 MITD1Q8WV92 249 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 TMEM230Q96A57 120 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 ENY2Q9NPA8 101 aa9.52□□□□□ -0.89
HDAC6-227ENST00000485102 RYR1P21817 5038 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 TRAV6A0A075B6T7 132 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 IGHV3OR16-8A0A075B7F1 116 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 TRAV14DV4A0A0A6YYC5 116 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 C15orf61A6NNL5 157 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 C11orf94C9JXX5 98 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 INMT-MINDY4F8WBC2 141 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 ZNF207O43670 478 aaKnown RBP9.51□□□□□ -0.89
HDAC6-227ENST00000485102 MED6O75586 246 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 DFFBO76075 338 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 SULT1A3P0DMM9 295 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 SULT1A4P0DMN0 295 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 MFAP4P55083 255 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-227ENST00000485102 PAFAH1B2P68402 229 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 ZNF124Q15973 351 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 SP6Q3SY56 376 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 Q56UQ5 140 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 NRARPQ7Z6K4 114 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 SELENOHQ8IZQ5 122 aaKnown RBP9.51□□□□□ -0.89
HDAC6-227ENST00000485102 ZNF431Q8TF32 576 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-227ENST00000485102 TMEM14BQ9NUH8 114 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 APLNQ9ULZ1 77 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 OR51B2Q9Y5P1 312 aa9.51□□□□□ -0.89
HDAC6-227ENST00000485102 IGHV3-21A0A0B4J1V1 117 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 TRAV2A0A0B4J234 112 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 FAM90A26D6RGX4 464 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 I3L2K1 104 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC6-227ENST00000485102 SUPT4H1P63272 117 aaKnown RBP9.5□□□□□ -0.89
HDAC6-227ENST00000485102 ERHP84090 104 aaKnown RBP9.5□□□□□ -0.89
HDAC6-227ENST00000485102 IFITM3Q01628 133 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 UBAC2Q8NBM4 344 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 ZNF114Q8NC26 417 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 FBXL17Q9UF56 701 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 MUC4Q99102 2169 aa9.5□□□□□ -0.89
HDAC6-227ENST00000485102 AGRNO00468 2067 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 FAT2Q9NYQ8 4349 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 ANXA7P20073 488 aaKnown RBP9.49□□□□□ -0.89
HDAC6-227ENST00000485102 SPCS3P61009 180 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 HSPE1P61604 102 aaKnown RBP9.49□□□□□ -0.89
HDAC6-227ENST00000485102 RPP30P78346 268 aaKnown RBP9.49□□□□□ -0.89
HDAC6-227ENST00000485102 SMCO1Q147U7 214 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 SLC35G3Q8N808 338 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 HINT2Q9BX68 163 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 NSG2Q9Y328 171 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 PKHD1P08F94 4074 aa9.49□□□□□ -0.89
HDAC6-227ENST00000485102 DBX1A6NMT0 343 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 CORTO00230 105 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 YIF1AO95070 293 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 CA1P00915 261 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-227ENST00000485102 IFNA17P01571 189 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 CYCSP99999 105 aaKnown RBP9.48□□□□□ -0.89
HDAC6-227ENST00000485102 PRCDQ00LT1 54 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 AARDQ4LEZ3 155 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 TMEM41BQ5BJD5 291 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 C12orf45Q8N5I9 185 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-227ENST00000485102 Q8NAQ8 132 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 ASB13Q8WXK3 278 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-227ENST00000485102 GINS3Q9BRX5 216 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 FLVCR2Q9UPI3 526 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 DNAH2Q9P225 4427 aa9.48□□□□□ -0.89
HDAC6-227ENST00000485102 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 IGKV1-39P01597 117 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 IGKV1-5P01602 117 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 IGKV1D-39P04432 117 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 P0C879 139 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 SNCAP37840 140 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 TFPI2P48307 235 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 NMSQ5H8A3 153 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 TCF24Q7RTU0 167 aa9.47□□□□□ -0.89
HDAC6-227ENST00000485102 OR1S1Q8NH92 325 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms