RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 LRTM2Q8N967 370 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 RNASEH2CQ8TDP1 164 aaKnown RBP9.13□□□□□ -0.95
MSH5-216ENST00000484309 MAGT1Q9H0U3 335 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 EDA2RQ9HAV5 297 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 NDUFA13Q9P0J0 144 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 PAIP2BQ9ULR5 123 aaKnown RBP9.13□□□□□ -0.95
MSH5-216ENST00000484309 C3orf84H3BNL1 204 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 PITX3O75364 302 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 SCGB2A1O75556 95 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 IFNA4P05014 189 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 SLC25A4P12235 298 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
MSH5-216ENST00000484309 OR10J1P30954 320 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 RPL11P62913 178 aaKnown RBP9.12□□□□□ -0.95
MSH5-216ENST00000484309 GGNBP1Q5YKI7 109 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 FAM90A2PQ658T7 463 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 OR1S2Q8NGQ3 325 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 NPIPB3Q92617 1050 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 VSIRQ9H7M9 311 aa9.12□□□□□ -0.95
MSH5-216ENST00000484309 KMT2CQ8NEZ4 4911 aaKnown RBP9.11□□□□□ -0.95
MSH5-216ENST00000484309 TRAV30A0A087WSZ9 112 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 C9orf170A2RU37 121 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 ADAP1O75689 374 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 ANXA7P20073 488 aaKnown RBP9.11□□□□□ -0.95
MSH5-216ENST00000484309 NPPCP23582 126 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 BMI1P35226 326 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 CASC10Q5T4H9 136 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 ETFRF1Q6IPR1 90 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 NOXA1Q86UR1 476 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 METTL26Q96S19 204 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 CACFD1Q9UGQ2 172 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 TMED3Q9Y3Q3 217 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 U3KQ87 197 aa9.11□□□□□ -0.95
MSH5-216ENST00000484309 PIGBOS1A0A0B4J2F0 54 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 CENPXA8MT69 81 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 MPTX1A8MV57 137 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 DNASE2O00115 360 aaPredicted RBP9.1□□□□□ -0.95
MSH5-216ENST00000484309 WRBO00258 174 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 OR4E1P0C645 316 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 LYL1P12980 280 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 P2RY1P47900 373 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 UBE2MP61081 183 aaKnown RBP9.1□□□□□ -0.95
MSH5-216ENST00000484309 DHRS2Q13268 280 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 Q8WTZ3 238 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 MS4A6AQ9H2W1 248 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 MAP6D1Q9H9H5 199 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 RABAC1Q9UI14 185 aa9.1□□□□□ -0.95
MSH5-216ENST00000484309 H3BP45 60 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 PLA2G10O15496 165 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 IL4P05112 153 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 SLC25A6P12236 298 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 CRYBB3P26998 211 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 YPEL3P61236 119 aaPredicted RBP9.09□□□□□ -0.95
MSH5-216ENST00000484309 PAFAH1B2P68402 229 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 USF2Q15853 346 aaPredicted RBP9.09□□□□□ -0.95
MSH5-216ENST00000484309 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 C4orf46Q504U0 113 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 LYG2Q86SG7 212 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 SLC35E1Q96K37 410 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 C7orf50Q9BRJ6 194 aaKnown RBP9.09□□□□□ -0.95
MSH5-216ENST00000484309 OVOL2Q9BRP0 275 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
MSH5-216ENST00000484309 A0A1W2PS18 150 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 FAM90A26D6RGX4 464 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 LYRM1O43325 122 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 SYNGR2O43760 224 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 MED6O75586 246 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 TOMM40O96008 361 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 HNRNPCP07910 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
MSH5-216ENST00000484309 PSG1P11464 419 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 APOC4P55056 127 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 GAMTQ14353 236 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 LEMD1Q68G75 181 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 COQ8AQ8NI60 647 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 NARS2Q96I59 477 aaKnown RBP9.08□□□□□ -0.96
MSH5-216ENST00000484309 C20orf85Q9H1P6 137 aa9.08□□□□□ -0.96
MSH5-216ENST00000484309 IGKV1D-37A0A075B6S9 117 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 TRAV6A0A075B6T7 132 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 ZFP92A6NM28 416 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 RD3LP0DJH9 198 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 DEFB131AP59861 70 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 RAB11AP62491 216 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 ZNF90Q03938 601 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 OR2F1Q13607 317 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 CNPY1Q3B7I2 92 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 SPANXN5Q5MJ07 72 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 OR51G1Q8NGK1 321 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 GRAMD2BQ96HH9 432 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 PBDC1Q9BVG4 233 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 STARD9Q9P2P6 4700 aa9.07□□□□□ -0.96
MSH5-216ENST00000484309 DYNC2H1Q8NCM8 4307 aaKnown RBP9.06□□□□□ -0.96
MSH5-216ENST00000484309 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 SCGB1D2O95969 90 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 IFNA21P01568 189 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 CD5P06127 495 aa9.06□□□□□ -0.96
MSH5-216ENST00000484309 GPX4P36969 197 aaPredicted RBP9.06□□□□□ -0.96
MSH5-216ENST00000484309 ATP5IP56385 69 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms