RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 SMDT1Q9H4I9 107 aa11.75□□□□□ -0.53
PHGDH-205ENST00000482968 THYN1Q9P016 225 aa11.75□□□□□ -0.53
PHGDH-205ENST00000482968 FBXL7Q9UJT9 491 aa11.75□□□□□ -0.53
PHGDH-205ENST00000482968 ZNF580Q9UK33 172 aa11.75□□□□□ -0.53
PHGDH-205ENST00000482968 TEP1Q99973 2627 aaKnown RBP11.75□□□□□ -0.53
PHGDH-205ENST00000482968 NDUFB8O95169 186 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 GPX4P36969 197 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-205ENST00000482968 DLK1P80370 383 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 CFHR3Q02985 330 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 BTNL8Q6UX41 500 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-205ENST00000482968 LURAP1LQ8IV03 231 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 CACNG8Q8WXS5 425 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 S4R3C0 116 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 I3L2K1 104 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 DFFBO76075 338 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 TSPAN15O95858 294 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 PF4V1P10720 104 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
PHGDH-205ENST00000482968 RHOGP84095 191 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 GAMTQ14353 236 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 ETFRF1Q6IPR1 90 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 SLC16A13Q7RTY0 426 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 UBAC2Q8NBM4 344 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 TMEM147Q9BVK8 224 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 GGACTQ9BVM4 153 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 KLK15Q9H2R5 256 aa11.74□□□□□ -0.53
PHGDH-205ENST00000482968 TRBV9A0A0B4J1U6 114 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 UBE2L5PA0A1B0GUS4 154 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 PSMB11A5LHX3 300 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 COLCA2A8K830 154 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 K7EIM0 57 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 IGLV1-40P01703 118 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 TRGV3P03979 118 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 SLC35B1P78383 322 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 ZNF266Q14584 549 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 LCNL1Q6ZST4 164 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 LYPD6BQ8NI32 183 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 ACY3Q96HD9 319 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 NPVFQ9HCQ7 196 aa11.73□□□□□ -0.53
PHGDH-205ENST00000482968 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
PHGDH-205ENST00000482968 NIPBLQ6KC79 2804 aaeCLIP11.73□□□□□ -0.53
PHGDH-205ENST00000482968 IFNA5P01569 189 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 IGHG4P01861 327 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 TPPP2P59282 170 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 C15orf32Q32M92 178 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 NECAP1Q8NC96 275 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 NPIPB3Q92617 1050 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 SLC35E1Q96K37 410 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 TMEM231Q9H6L2 316 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 UBE2CO00762 179 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 IGHV3-23P01764 117 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 RAB9AP51151 201 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 RND2P52198 227 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 SRSF3P84103 164 aaKnown RBP11.72□□□□□ -0.53
PHGDH-205ENST00000482968 RHEBQ15382 184 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 KLK9Q2XQG4 91 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 ACSM6Q6P461 480 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 TEX38Q6PEX7 206 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 LINC01006Q8NI28 216 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 SCGB1C1Q8TD33 95 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 C16orf95Q9H693 158 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 KLK9Q9UKQ9 250 aa11.72□□□□□ -0.53
PHGDH-205ENST00000482968 H3BUA1 57 aa11.71□□□□□ -0.54
PHGDH-205ENST00000482968 S100PP25815 95 aa11.71□□□□□ -0.54
PHGDH-205ENST00000482968 Q6ZRG5 221 aa11.71□□□□□ -0.54
PHGDH-205ENST00000482968 HSD17B11Q8NBQ5 300 aa11.71□□□□□ -0.54
PHGDH-205ENST00000482968 ARV1Q9H2C2 271 aa11.71□□□□□ -0.54
PHGDH-205ENST00000482968 RPS10P5Q9NQ39 176 aa11.71□□□□□ -0.54
PHGDH-205ENST00000482968 C5orf52A6NGY3 159 aa11.7□□□□□ -0.54
PHGDH-205ENST00000482968 FNDC10F2Z333 226 aa11.7□□□□□ -0.54
PHGDH-205ENST00000482968 FGF7P21781 194 aa11.7□□□□□ -0.54
PHGDH-205ENST00000482968 PSMB8P28062 276 aa11.7□□□□□ -0.54
PHGDH-205ENST00000482968 ATP5G2Q06055 141 aa11.7□□□□□ -0.54
PHGDH-205ENST00000482968 TMEM144Q7Z5S9 345 aa11.7□□□□□ -0.54
PHGDH-205ENST00000482968 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
PHGDH-205ENST00000482968 WDR61Q9GZS3 305 aaKnown RBP11.7□□□□□ -0.54
PHGDH-205ENST00000482968 EIF3GO75821 320 aaKnown RBP eCLIP11.69□□□□□ -0.54
PHGDH-205ENST00000482968 NDUFA7O95182 113 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 BRI3O95415 125 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 RUNX1Q01196 453 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 VN1R17PQ8TDU5 208 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 C21orf62Q9NYP8 219 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 WDR83OSQ9Y284 106 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 RFNGQ9Y644 331 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 IGKV1OR2-108A0A075B7D4 117 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 FAM223BA6NKX1 122 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-205ENST00000482968 MFAP4P55083 255 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 SNRPEP62304 92 aaKnown RBP11.69□□□□□ -0.54
PHGDH-205ENST00000482968 FAM223AQ8IWN6 122 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 OR4F5Q8NH21 305 aa11.69□□□□□ -0.54
PHGDH-205ENST00000482968 OR4X1Q8NH49 305 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms