RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-205	ENST00000481788	FKBP14	Q9NWM8	211 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	XCL2	Q9UBD3	114 aa		4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	AK6	Q9Y3D8	172 aa	Known RBP	4.62	□□□□□ -1.67
RBM28-205	ENST00000481788	TMEM189	A5PLL7	270 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	SMIM9	A6NGZ8	99 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	TNFSF12	O43508	249 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	HPRT1	P00492	218 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	IGHV3-48	P01763	117 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	NQO2	P16083	231 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	CRYBB3	P26998	211 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	EMP1	P54849	157 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	PRSS48	Q7RTY5	328 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	C15orf53	Q8NAA6	179 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	ZNF114	Q8NC26	417 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	OR1L8	Q8NGR8	309 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	FRZB	Q92765	325 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	SLC25A46	Q96AG3	418 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	CENPO	Q9BU64	300 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788		Q9H3A6	140 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	DUSP21	Q9H596	190 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	PLEKHA2	Q9HB19	425 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	PLGRKT	Q9HBL7	147 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	CCL28	Q9NRJ3	127 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	PLCXD1	Q9NUJ7	323 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	RABAC1	Q9UI14	185 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	PSORS1C1	Q9UIG5	152 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	RAB22A	Q9UL26	194 aa		4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
RBM28-205	ENST00000481788	TEX48	A0A1B0GUV7	120 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	SULT1C2	O00338	296 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	CYB5B	O43169	146 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	SSX5	O60225	188 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	MT-CO2	P00403	227 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	SMR3B	P02814	79 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	CTXN2	P0C2S0	81 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	HLA-DRB4	P13762	266 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	HTN3	P15516	51 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	PSMB9	P28065	219 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	P2RY1	P47900	373 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	MFAP4	P55083	255 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	TBCE	Q15813	527 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	GDF5OS	Q5U4N7	250 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	CNIH2	Q6PI25	160 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	ZNF600	Q6ZNG1	722 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	C1orf158	Q8N1D5	194 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	STXBP6	Q8NFX7	210 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	GLMP	Q8WWB7	406 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	FCGR1B	Q92637	280 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	C17orf77	Q96MU5	243 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	GINS3	Q9BRX5	216 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	C1QTNF4	Q9BXJ3	329 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	RBM38	Q9H0Z9	239 aa	Known RBP	4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	COMMD9	Q9P000	198 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	MRPL36	Q9P0J6	103 aa	Known RBP	4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	RSL24D1	Q9UHA3	163 aa	Known RBP	4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	NSG2	Q9Y328	171 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	TMED3	Q9Y3Q3	217 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	RFNG	Q9Y644	331 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788	HLA-DRB4	X5D2U9	266 aa		4.6	□□□□□ -1.67
RBM28-205	ENST00000481788		A0A075B6Q4	140 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	PLAC8L1	A1L4L8	177 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	FAM90A26	D6RGX4	464 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	MYL12B	O14950	172 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	PTHLH	P12272	177 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	PPP5C	P53041	499 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	DEFB1	P60022	68 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	MRPS15	P82914	257 aa	Known RBP	4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	CNPY1	Q3B7I2	92 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	PSMG4	Q5JS54	123 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	SERTAD4-AS1	Q5TG53	156 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	GPR107	Q5VW38	600 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	HACD4	Q5VWC8	232 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	OR13F1	Q8NGS4	319 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788		Q9H8V8	135 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	SEPSECS	Q9HD40	501 aa	Known RBP	4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	ACOT13	Q9NPJ3	140 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788	ANXA10	Q9UJ72	324 aa		4.59	□□□□□ -1.67
RBM28-205	ENST00000481788		A0A1W2PPQ1	181 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	ZNF701	M0R085	212 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	TMEM50A	O95807	157 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	IGKV1-17	P01599	117 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	MBP	P02686	304 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	OR10A3	P58181	314 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	NUTF2	P61970	127 aa	Known RBP	4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	RPS25	P62851	125 aa	Known RBP	4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	LCE1A	Q5T7P2	110 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	HES5	Q5TA89	166 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	ZNF818P	Q6ZRF7	136 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	SSX7	Q7RTT5	188 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	CCDC28A	Q8IWP9	274 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	RAB2B	Q8WUD1	216 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	NUDCD2	Q8WVJ2	157 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	SECTM1	Q8WVN6	248 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	TMEM203	Q969S6	136 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	TSC22D3	Q99576	134 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	ATG101	Q9BSB4	218 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	UPK3B	Q9BT76	320 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	MND1	Q9BWT6	205 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms