RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SPSB3Q6PJ21 355 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 BTNL8Q6UX41 500 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 SLC16A13Q7RTY0 426 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 OR4X1Q8NH49 305 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 RNASEH2CQ8TDP1 164 aaKnown RBP7.98□□□□□ -1.13
SSBP1-210ENST00000481508 WDR89Q96FK6 387 aaPredicted RBP7.98□□□□□ -1.13
SSBP1-210ENST00000481508 MARVELD1Q9BSK0 173 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 C20orf24Q9BUV8 137 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 GSKIPQ9P0R6 139 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 U3KQ87 197 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 DNAH7Q8WXX0 4024 aa7.98□□□□□ -1.13
SSBP1-210ENST00000481508 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 ZNF785A8K8V0 405 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 FAM25EA8MYX2 175 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 MED6O75586 246 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 SIX6O95475 246 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 MBPP02686 304 aaPredicted RBP7.97□□□□□ -1.13
SSBP1-210ENST00000481508 IGLC1P0CG04 106 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 C8orf88P0DMB2 117 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
SSBP1-210ENST00000481508 NPBWR1P48145 328 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 DEFA1P59665 94 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 DEFA3P59666 94 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 CD69Q07108 199 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 IL15RAQ13261 267 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 SPANXN5Q5MJ07 72 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 TOMM20LQ6UXN7 152 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 NPIPB3Q92617 1050 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 C11orf1Q9H5F2 150 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 CACFD1Q9UGQ2 172 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 PAIP2BQ9ULR5 123 aaKnown RBP7.97□□□□□ -1.13
SSBP1-210ENST00000481508 LSM4Q9Y4Z0 139 aaKnown RBP7.97□□□□□ -1.13
SSBP1-210ENST00000481508 RYR1P21817 5038 aa7.97□□□□□ -1.13
SSBP1-210ENST00000481508 IGKV1D-37A0A075B6S9 117 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 RPS10-NUDT3A0A1W2PQS6 291 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 C5orf51A6NDU8 294 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 PMS2P5A8MQ11 134 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 APOHP02749 345 aaPredicted RBP7.96□□□□□ -1.14
SSBP1-210ENST00000481508 IFNA4P05014 189 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 TMEM61Q8N0U2 210 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 Q8N1Y9 231 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 Q8N3U1 123 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 TMEM116Q8NCL8 245 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 DYNLRB2Q8TF09 96 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 ACY3Q96HD9 319 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 PSENENQ9NZ42 101 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 UFC1Q9Y3C8 167 aa7.96□□□□□ -1.14
SSBP1-210ENST00000481508 PUS1Q9Y606 427 aaKnown RBP eCLIP7.96□□□□□ -1.14
SSBP1-210ENST00000481508 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 IGHV3-74A0A0B4J1X5 117 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 K7EPK0 472 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 GOSR2O14653 212 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 YIF1AO95070 293 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 SCAF4O95104 1147 aaKnown RBP7.95□□□□□ -1.14
SSBP1-210ENST00000481508 SLC25A4P12235 298 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 OR10J1P30954 320 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 ELLP55199 621 aaPredicted RBP7.95□□□□□ -1.14
SSBP1-210ENST00000481508 RELQ04864 619 aaPredicted RBP7.95□□□□□ -1.14
SSBP1-210ENST00000481508 ARL16Q0P5N6 197 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 GAMTQ14353 236 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 DEFB121Q5J5C9 76 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 ZNF600Q6ZNG1 722 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 LILRB2Q8N423 598 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 C2orf50Q96LR7 162 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 CIB3Q96Q77 187 aaPredicted RBP7.95□□□□□ -1.14
SSBP1-210ENST00000481508 PALMDQ9NP74 551 aa7.95□□□□□ -1.14
SSBP1-210ENST00000481508 DAZ1Q9NQZ3 744 aaKnown RBP7.95□□□□□ -1.14
SSBP1-210ENST00000481508 LSM5Q9Y4Y9 91 aaKnown RBP7.95□□□□□ -1.14
SSBP1-210ENST00000481508 IGKV1OR2-108A0A075B7D4 117 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 IGHV3-66A0A0C4DH42 116 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 C7orf66A4D0T2 115 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 SNRPGP15A8MWD9 76 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 K7EMT4 169 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 CHEK1O14757 476 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 PRAF2O60831 178 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 LCN12Q6JVE5 192 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 TMEM14EPQ6UXP3 125 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 GSG1LQ6UXU4 331 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 OR1S2Q8NGQ3 325 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 SMIM8Q96KF7 97 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 WFDC10AQ9H1F0 79 aa7.94□□□□□ -1.14
SSBP1-210ENST00000481508 GPN1Q9HCN4 374 aaPredicted RBP7.94□□□□□ -1.14
SSBP1-210ENST00000481508 TECRQ9NZ01 308 aaKnown RBP7.94□□□□□ -1.14
SSBP1-210ENST00000481508 MRPL27Q9P0M9 148 aaKnown RBP7.94□□□□□ -1.14
SSBP1-210ENST00000481508 STRAPQ9Y3F4 350 aaKnown RBP7.94□□□□□ -1.14
SSBP1-210ENST00000481508 PTTG1O95997 202 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 CD7P09564 240 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 METTL15P1P0C7V9 234 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 GPX4P36969 197 aaPredicted RBP7.93□□□□□ -1.14
SSBP1-210ENST00000481508 ATP5IP56385 69 aaPredicted RBP7.93□□□□□ -1.14
SSBP1-210ENST00000481508 H2BFSP57053 126 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 RAB11AP62491 216 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 ZNF90Q03938 601 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 RAB32Q13637 225 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 USF2Q15853 346 aaPredicted RBP7.93□□□□□ -1.14
SSBP1-210ENST00000481508 GUCA2BQ16661 112 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 OR8G2PQ6IF36 304 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 ETFRF1Q6IPR1 90 aa7.93□□□□□ -1.14
SSBP1-210ENST00000481508 ACOT7LQ6ZUV0 252 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms