RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	NCALD	P61601	193 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	SUPT4H1	P63272	117 aa	Known RBP	0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	SS18	Q15532	418 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	RRN3P1	Q2M238	152 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	FAM27B	Q5VT28	67 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	EIF5AL1	Q6IS14	154 aa	Known RBP	0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	LCN15	Q6UWW0	184 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	C7orf65	Q6ZTY9	151 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	LCA10	Q71F78	164 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	SMIM15	Q7Z3B0	74 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	COA5	Q86WW8	74 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	DEFB119	Q8N690	84 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	SIGLECL1	Q8N7X8	197 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	C12orf29	Q8N999	325 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	NEK7	Q8TDX7	302 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	ZNF431	Q8TF32	576 aa	Predicted RBP	0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	CANT1	Q8WVQ1	401 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	TEX37	Q96LM6	180 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	PRRT1	Q99946	306 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	OR2J1	Q9GZK6	312 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	RNASE7	Q9H1E1	156 aa	Known RBP	0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	SH3BGRL3	Q9H299	93 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	BOLA2	Q9H3K6	86 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	C14orf132	Q9NPU4	83 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	ACER3	Q9NUN7	267 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	GID8	Q9NWU2	228 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	SNURF	Q9Y675	71 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	TMEM131	Q92545	1883 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	SLIT2	O94813	1529 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	ZFYVE9	O95405	1425 aa		0.62	□□□□□ -2.31
CCNL1-223	ENST00000481173	DENND4B	O75064	1496 aa	Predicted RBP	0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	EIF3A	Q14152	1382 aa	Known RBP	0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	ADGRB3	O60242	1522 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	KDM5B	Q9UGL1	1544 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	TRBV6-5	A0A0K0K1A5	114 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173		A0A1B0GV72	72 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	TMEM212	A6NML5	194 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	CLDN25	C9JDP6	229 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	PPP5D1	E7EU14	171 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173		H3BQV1	296 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	BANF1	O75531	89 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	UBL3	O95164	117 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	FAM107A	O95990	144 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	CRH	P06850	196 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	ZNF705B	P0CI00	300 aa	Predicted RBP	0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	OGN	P20774	298 aa	Known RBP	0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	SERPINB1	P30740	379 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	BRS3	P32247	399 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	UBE2B	P63146	152 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	GNG5	P63218	68 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	RUNX1	Q01196	453 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	NNAT	Q16517	81 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	LINC01554	Q52M75	96 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	BRMS1L	Q5PSV4	323 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	PPP1R2P3	Q6NXS1	205 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	FAM173B	Q6P4H8	233 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	C22orf39	Q6P5X5	142 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	DCUN1D2	Q6PH85	259 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	C2orf82	Q6UX34	121 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	ZNF826P	Q6ZT77	177 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	GRINA	Q7Z429	371 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	FAM24B	Q8N5W8	94 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	NUP35	Q8NFH5	326 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	OR13D1	Q8NGV5	346 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	PPTC7	Q8NI37	304 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	TMEM254	Q8TBM7	123 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	DYDC1	Q8WWB3	177 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	ISOC1	Q96CN7	298 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	ZNF714	Q96N38	554 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	SLC50A1	Q9BRV3	221 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	GINS3	Q9BRX5	216 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	CCDC32	Q9BV29	185 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	TRABD	Q9H4I3	376 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	SPANXA1	Q9NS26	97 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	SPANXC	Q9NY87	97 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	RASL12	Q9NYN1	266 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	PRND	Q9UKY0	176 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	SOX21	Q9Y651	276 aa	Predicted RBP	0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	LY96	Q9Y6Y9	160 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	CCDC144A	A2RUR9	1427 aa		0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	SCAF11	Q99590	1463 aa	Known RBP	0.61	□□□□□ -2.31
CCNL1-223	ENST00000481173	MIA3	Q5JRA6	1907 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	ROBO3	Q96MS0	1386 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	IGKV1D-43	A0A0B4J1Z2	117 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	TRAV5	A0A0B4J249	113 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	TRAV4	A0A0B4J268	109 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173		A8MWV9	139 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	IBA57-AS1	B1ANH7	110 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	TMEM238	C9JI98	176 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173		E7EQ34	232 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	BUB1B-PAK6	H3BSN5	160 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	GPR31	O00270	319 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	TAX1BP3	O14907	124 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	NDUFB3	O43676	98 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	HYPM	O75409	117 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	IGKV2D-40	P01614	121 aa	Predicted RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	OR10J4	P0C629	311 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	MGST1	P10620	155 aa	Known RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	DEFA4	P12838	97 aa		0.6	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms