RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 ZNRD1Q9P1U0 126 aa11.17□□□□□ -0.62
USP42-206ENST00000479544 DSCAML1Q8TD84 2053 aa11.17□□□□□ -0.62
USP42-206ENST00000479544 SELENOTP62341 195 aa11.17□□□□□ -0.62
USP42-206ENST00000479544 FOXC1Q12948 553 aa11.17□□□□□ -0.62
USP42-206ENST00000479544 WDR82Q6UXN9 313 aa11.17□□□□□ -0.62
USP42-206ENST00000479544 ZC2HC1AQ96GY0 325 aa11.17□□□□□ -0.62
USP42-206ENST00000479544 Q6P435 159 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 SMIM12Q96EX1 92 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 TMEM189A5PLL7 270 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 ZNF503-AS2A6NEH8 195 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 H7C2G1 150 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 CCL3L1P16619 93 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 LINC00470Q9BZP3 86 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 XIRP2A4UGR9 3374 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 THADAQ6YHU6 1953 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 NKX2-8O15522 239 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 IGLL1P15814 213 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 CLDN18P56856 261 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 OR10J3Q5JRS4 329 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 NUP35Q8NFH5 326 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 OR52E5Q8NH55 327 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
USP42-206ENST00000479544 CCL25O15444 150 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 RELQ04864 619 aaPredicted RBP11.15□□□□□ -0.62
USP42-206ENST00000479544 SLAQ13239 276 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 COQ2Q96H96 371 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 ZNF414Q96IQ9 312 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 TMEM160Q9NX00 188 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 RPP21Q9H633 154 aaKnown RBP11.15□□□□□ -0.62
USP42-206ENST00000479544 TRAV9-1A0A075B6T8 112 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.62
USP42-206ENST00000479544 IGHV1-2P23083 117 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 C2orf83Q53S99 150 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 GPR82Q96P67 336 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 MYO18BQ8IUG5 2567 aa11.15□□□□□ -0.62
USP42-206ENST00000479544 C21orf140B9A014 251 aa11.15□□□□□ -0.63
USP42-206ENST00000479544 TGFAP01135 160 aa11.15□□□□□ -0.63
USP42-206ENST00000479544 C15orf61A6NNL5 157 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 CACNG7P62955 275 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 ZFP36L1Q07352 338 aaKnown RBP11.14□□□□□ -0.63
USP42-206ENST00000479544 MRPL20Q9BYC9 149 aaKnown RBP11.14□□□□□ -0.63
USP42-206ENST00000479544 A0A1B0GUT8 65 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 F5H697 171 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 KIR2DL2P43627 348 aaPredicted RBP11.14□□□□□ -0.63
USP42-206ENST00000479544 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 C18orf32Q8TCD1 76 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 HIST1H4GQ99525 98 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 SPOCK3Q9BQ16 436 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 PTPN13Q12923 2485 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 CFAP54Q96N23 3096 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 SSC4DQ8WTU2 575 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 ZNF714Q96N38 554 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 SFXN3Q9BWM7 321 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 IDI2-AS1Q9NZ38 188 aa11.14□□□□□ -0.63
USP42-206ENST00000479544 TRBV20OR9-2A0A075B6H5 130 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 PRRG2O14669 202 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 DEFB124Q8NES8 71 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 LOC102723996A0A087X1L8 192 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 TDGF1P13385 188 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
USP42-206ENST00000479544 NGBQ9NPG2 151 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 NHP2Q9NX24 153 aaKnown RBP11.13□□□□□ -0.63
USP42-206ENST00000479544 IL18BPO95998 194 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 PPIFP30405 207 aaKnown RBP11.13□□□□□ -0.63
USP42-206ENST00000479544 RPL15P61313 204 aaKnown RBP11.13□□□□□ -0.63
USP42-206ENST00000479544 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 CST9LQ9H4G1 147 aa11.13□□□□□ -0.63
USP42-206ENST00000479544 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 KIR2DL5BA0A0G2JN68 375 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 KIR2DL5BA0A0G2JPC4 375 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 KIR2DL5AQ8N109 375 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
USP42-206ENST00000479544 TMEM108Q6UXF1 575 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
USP42-206ENST00000479544 PRELID3AQ96N28 172 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 PYGO2Q9BRQ0 406 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 PTPRQQ9UMZ3 2332 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 FAM168AQ92567 244 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 IGHV1-69-2A0A0G2JMI3 117 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 IGHV3-23P01764 117 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 AREGP15514 252 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
USP42-206ENST00000479544 TRIP6Q15654 476 aaKnown RBP11.12□□□□□ -0.63
USP42-206ENST00000479544 TEX43Q6ZNM6 134 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 FGF23Q9GZV9 251 aaPredicted RBP11.12□□□□□ -0.63
USP42-206ENST00000479544 Q9H3A6 140 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 GP6Q9HCN6 339 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 EPDR1Q9UM22 224 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 CDH23Q9H251 3354 aa11.12□□□□□ -0.63
USP42-206ENST00000479544 K7EN84 100 aa11.11□□□□□ -0.63
USP42-206ENST00000479544 IGLV3-1P01715 115 aa11.11□□□□□ -0.63
USP42-206ENST00000479544 PSMB2P49721 201 aa11.11□□□□□ -0.63
USP42-206ENST00000479544 B3GALT5-AS1P59052 145 aa11.11□□□□□ -0.63
USP42-206ENST00000479544 Q0VFX4 171 aa11.11□□□□□ -0.63
USP42-206ENST00000479544 OCIAD2Q56VL3 154 aa11.11□□□□□ -0.63
USP42-206ENST00000479544 MYOZ3Q8TDC0 251 aa11.11□□□□□ -0.63
USP42-206ENST00000479544 SCNM1Q9BWG6 230 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms