RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 FAM169BQ8N8A8 192 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 PLCE1Q9P212 2302 aa11.83□□□□□ -0.51
COL20A1-206ENST00000479501 TRAV8-6A0A0B4J262 113 aa11.83□□□□□ -0.51
COL20A1-206ENST00000479501 LINC00205P59089 165 aa11.83□□□□□ -0.51
COL20A1-206ENST00000479501 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.51
COL20A1-206ENST00000479501 RAXQ9Y2V3 346 aa11.83□□□□□ -0.51
COL20A1-206ENST00000479501 SPCS1Q9Y6A9 102 aa11.83□□□□□ -0.51
COL20A1-206ENST00000479501 ZNF324O75467 553 aaPredicted RBP11.83□□□□□ -0.52
COL20A1-206ENST00000479501 TNFSF13O75888 250 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 IL4P05112 153 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 ZNF585BQ52M93 769 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 PRB3Q04118 309 aaPredicted RBP11.83□□□□□ -0.52
COL20A1-206ENST00000479501 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 TMEM208Q9BTX3 173 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 PRSS2P07478 247 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 CRIM1Q9NZV1 1036 aa11.83□□□□□ -0.52
COL20A1-206ENST00000479501 KIAA1549LQ6ZVL6 1849 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 MED13Q9UHV7 2174 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 APOHP02749 345 aaPredicted RBP11.82□□□□□ -0.52
COL20A1-206ENST00000479501 TM4SF20Q53R12 229 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 TTC32Q5I0X7 151 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 LYPD6Q86Y78 171 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 C18orf15Q96N68 181 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 KLK15Q9H2R5 256 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 UTRNP46939 3433 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 HTN1P15515 57 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 CD69Q07108 199 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 A0A0G2JNJ9 132 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 A0A1B0GW64 132 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 PEX7O00628 323 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 EAF1Q96JC9 268 aaPredicted RBP11.82□□□□□ -0.52
COL20A1-206ENST00000479501 Q9UFV3 132 aa11.82□□□□□ -0.52
COL20A1-206ENST00000479501 IGHV3-35A0A0C4DH35 117 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 OR11H12B2RN74 326 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 IGKV1D-33P01593 117 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 IGKV1-33P01594 117 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 RPS20P60866 119 aaKnown RBP11.81□□□□□ -0.52
COL20A1-206ENST00000479501 RBPMS2Q6ZRY4 209 aaKnown RBP11.81□□□□□ -0.52
COL20A1-206ENST00000479501 OR11H1Q8NG94 326 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 OR11H2Q8NH07 326 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 CENPFP49454 3210 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 A0A1B0GUT8 65 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 IZUMO1RA6ND01 250 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 LMO1P25800 156 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 MST1LQ2TV78 715 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 H3BUT2 72 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 EFNB3Q15768 340 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 A0A1B0GWB2 263 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 FOXH1O75593 365 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 GGTLC1Q9BX51 225 aa11.81□□□□□ -0.52
COL20A1-206ENST00000479501 ANOS1P23352 680 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 LOXL3P58215 753 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 ZNF664Q8N3J9 261 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 MEGF9Q9H1U4 602 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 TRAV3A0A0B4J244 114 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 CGB1A6NKQ9 187 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 GPR183P32249 361 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 WDR86Q86TI4 376 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 PPP1R27Q86WC6 154 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 SPOCK3Q9BQ16 436 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 ZNF257Q9Y2Q1 563 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 C9JQL5 133 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 TMEM178BH3BS89 294 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 PF4V1P10720 104 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 ATP5J2P56134 94 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 OR10W1Q8NGF6 305 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 RABAC1Q9UI14 185 aa11.8□□□□□ -0.52
COL20A1-206ENST00000479501 TMEM50AO95807 157 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 TDGF1P13385 188 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 ERVK11-1P61568 191 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 METTL26Q96S19 204 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 Q6ZR03 302 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 PRELID3AQ96N28 172 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 SSBP4Q9BWG4 385 aaPredicted RBP11.79□□□□□ -0.52
COL20A1-206ENST00000479501 FOXA2Q9Y261 457 aaPredicted RBP11.79□□□□□ -0.52
COL20A1-206ENST00000479501 S4R3C0 116 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 MALRD1Q5VYJ5 2156 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 FOXI3A8MTJ6 420 aaPredicted RBP11.79□□□□□ -0.52
COL20A1-206ENST00000479501 TMEM200BQ69YZ2 307 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 RPRMLQ8N4K4 120 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 YLPM1P49750 1951 aaKnown RBP11.79□□□□□ -0.52
COL20A1-206ENST00000479501 PCNX3Q9H6A9 2034 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 NUP37Q8NFH4 326 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 SSC4DQ8WTU2 575 aa11.79□□□□□ -0.52
COL20A1-206ENST00000479501 PDLIM4P50479 330 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 Q5PR19 223 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 OSTCQ9NRP0 149 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 LINC00614P0C842 121 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 GZMBP10144 247 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms