RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 MIXL1Q9H2W2 232 aa1.04□□□□□ -2.24
CCDC58-204ENST00000479414 IDI2-AS1Q9NZ38 188 aa1.04□□□□□ -2.24
CCDC58-204ENST00000479414 TENM3Q9P273 2699 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 hCG_1818297A0A087WSY0 165 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 A8MT66 165 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 RBP1P09455 135 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 BAALC-AS2P0C853 105 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 DEFB115Q30KQ5 88 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 KRT222Q8N1A0 295 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 ZNF418Q8TF45 676 aaPredicted RBP1.03□□□□□ -2.24
CCDC58-204ENST00000479414 CT55Q8WUE5 264 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 CCDC90BQ9GZT6 254 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 OR51V1Q9H2C8 321 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 KLK9Q9UKQ9 250 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 CCDC144AA2RUR9 1427 aa1.03□□□□□ -2.24
CCDC58-204ENST00000479414 EML5Q05BV3 1969 aa1.03□□□□□ -2.25
CCDC58-204ENST00000479414 TRAV12-1A0A0B4J245 112 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 IGKV1-9A0A0C4DH69 117 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 C1orf196B1AJZ1 125 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 HYPMO75409 117 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 OR4E1P0C645 316 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 SRIP30626 198 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 RHOGP84095 191 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 GDPD1Q8N9F7 314 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 SLC25A40Q8TBP6 338 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 SFT2D1Q8WV19 159 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 BORCS7Q96B45 105 aa1.02□□□□□ -2.25
CCDC58-204ENST00000479414 MCM3APO60318 1980 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 S100A4P26447 101 aaKnown RBP1.01□□□□□ -2.25
CCDC58-204ENST00000479414 CDKN2CP42773 168 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 CEBPGP53567 150 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 LCA10Q71F78 164 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 TRAPPC6BQ86SZ2 158 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 Q8N814 137 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 OR10J5Q8NHC4 309 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 PPP1R14BQ96C90 147 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 CMSS1Q9BQ75 279 aaKnown RBP1.01□□□□□ -2.25
CCDC58-204ENST00000479414 UCK1Q9HA47 277 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 SBF1O95248 1867 aa1.01□□□□□ -2.25
CCDC58-204ENST00000479414 PIK3C2GO75747 1445 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 MYO3BQ8WXR4 1341 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 SULT1B1O43704 296 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 OR2B3O76000 313 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 CASP1P29466 404 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 EDDM3AQ14507 147 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 C1orf137Q5JT78 98 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 BRMS1LQ5PSV4 323 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 OR8D4Q8NGM9 314 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 PRAP1Q96NZ9 151 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 ACER3Q9NUN7 267 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 EPDR1Q9UM22 224 aa1□□□□□ -2.25
CCDC58-204ENST00000479414 UTP11Q9Y3A2 253 aaKnown RBP1□□□□□ -2.25
CCDC58-204ENST00000479414 MED1Q15648 1581 aaPredicted RBP1□□□□□ -2.25
CCDC58-204ENST00000479414 MYH7BA7E2Y1 1941 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 DENND4CQ5VZ89 1909 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 PDE6DO43924 150 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 HAND1O96004 215 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 SRSF6Q13247 344 aaKnown RBP0.99□□□□□ -2.25
CCDC58-204ENST00000479414 RGS21Q2M5E4 152 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 C3orf56Q8N813 242 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 OR52L1Q8NGH7 329 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 OR51A2Q8NGJ7 313 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 GLTPQ9NZD2 209 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 SCN8AQ9UQD0 1980 aa0.99□□□□□ -2.25
CCDC58-204ENST00000479414 A0A087X0T9 212 aa0.98□□□□□ -2.25
CCDC58-204ENST00000479414 CLDN25C9JDP6 229 aa0.98□□□□□ -2.25
CCDC58-204ENST00000479414 SERPINE1P05121 402 aa0.98□□□□□ -2.25
CCDC58-204ENST00000479414 YPEL3P61236 119 aaPredicted RBP0.98□□□□□ -2.25
CCDC58-204ENST00000479414 MRPL57Q9BQC6 102 aaKnown RBP0.98□□□□□ -2.25
CCDC58-204ENST00000479414 TRIM4Q9C037 500 aa0.98□□□□□ -2.25
CCDC58-204ENST00000479414 HS3ST2Q9Y278 367 aa0.98□□□□□ -2.25
CCDC58-204ENST00000479414 SNRNP200O75643 2136 aaKnown RBP0.97□□□□□ -2.25
CCDC58-204ENST00000479414 M0R2N4 97 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 C8GP07360 202 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 PPIBP23284 216 aaKnown RBP0.97□□□□□ -2.25
CCDC58-204ENST00000479414 SERPINB9P50453 376 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 TSNQ15631 228 aaKnown RBP0.97□□□□□ -2.25
CCDC58-204ENST00000479414 ESRGQ1W209 222 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 TMEM97Q5BJF2 176 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 Q6Q795 121 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 CLECL1Q8IZS7 167 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 OR6V1Q8N148 313 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 STAG3L4Q8TBR4 150 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 C2orf50Q96LR7 162 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 TMEM133Q9H2Q1 129 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 SLC35A3Q9Y2D2 325 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 LAMB4A4D0S4 1761 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 CASP8AP2Q9UKL3 1982 aa0.97□□□□□ -2.25
CCDC58-204ENST00000479414 TAF1LQ8IZX4 1826 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 TMEM114B3SHH9 223 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 ZNF25P17030 456 aaPredicted RBP0.96□□□□□ -2.26
CCDC58-204ENST00000479414 RNASE4P34096 147 aaKnown RBP0.96□□□□□ -2.26
CCDC58-204ENST00000479414 HIST1H3AP68431 136 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 H3F3AP84243 136 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 TEX261Q6UWH6 196 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 Q8IYB0 196 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 HIST1H2BLQ99880 126 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 CDC42SE1Q9NRR8 79 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 FBXO5Q9UKT4 447 aa0.96□□□□□ -2.26
CCDC58-204ENST00000479414 U3KQ87 197 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms