RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ZNF823P16415 610 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 IGFBP3P17936 291 aaPredicted RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 SRMP19623 302 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CXCL2P19875 107 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 RAB4AP20338 218 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 INSL3P51460 131 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 DSCR4P56555 118 aaPredicted RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TAS2R20P59543 309 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 STXBP1P61764 594 aaKnown RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TBPL1P62380 186 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 RPL23AP62750 156 aaKnown RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 BLCAPP62952 87 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 RAB11BQ15907 218 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 DEFB136Q30KP8 78 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 THEM4Q5T1C6 240 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF660Q6AZW8 331 aaPredicted RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 OR10K2Q6IF99 312 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 C5orf46Q6UWT4 87 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM91Q6ZNR0 172 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 OR2W3Q7Z3T1 314 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 LYPD6Q86Y78 171 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CA13Q8N1Q1 262 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 OR4K17Q8NGC6 315 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 OR5AK2Q8NH90 309 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 OR1S1Q8NH92 325 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TERB2Q8NHR7 220 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 SYNPRQ8TBG9 265 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 LGALS14Q8TCE9 139 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 LKAAEAR1Q8TD35 194 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 THEM6Q8WUY1 208 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 MAFIPQ8WZ33 124 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TNFRSF14Q92956 283 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TBX5Q99593 518 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF426Q9BUY5 554 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CMC2Q9NRP2 79 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 COA4Q9NYJ1 87 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TAC3Q9UHF0 121 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 SHPKQ9UHJ6 478 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CARHSP1Q9Y2V2 147 aaKnown RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 NOP16Q9Y3C1 178 aaKnown RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 A0A087WUU8 490 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 BORCS7-ASMTA0A0B4J1R7 106 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 OR5H14A6NHG9 310 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 A6NIN4 97 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF736B4DX44 427 aaPredicted RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 INS-IGF2F8WCM5 200 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 M0R036 132 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 FFAR1O14842 300 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 HMGB3O15347 200 aaKnown RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 FADS1O60427 444 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 NDUFB2O95178 105 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 FARS2O95363 451 aaKnown RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 GPR4P46093 362 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 CX3CR1P49238 355 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 P2RX1P51575 399 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 OR10A3P58181 314 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 UBE2MP61081 183 aaKnown RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF92Q03936 586 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 CDK5R1Q15078 307 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 USF2Q15853 346 aaPredicted RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 Q499Y3 187 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 HIKESHIQ53FT3 197 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 ACTBL2Q562R1 376 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 RNASE10Q5GAN6 216 aaKnown RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 HIST2H3PS2Q5TEC6 136 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 FBXW9Q5XUX1 488 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 C19orf35Q6ZS72 473 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 SLC25A48Q6ZT89 311 aaKnown RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 SSX9Q7RTT3 188 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 TMED4Q7Z7H5 227 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 NAA40Q86UY6 237 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 BAP18Q8IXM2 172 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF676Q8N7Q3 588 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 C15orf53Q8NAA6 179 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM229BQ8NBD8 167 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 LFNGQ8NES3 379 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 SLC26A10Q8NG04 563 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 OR7G2Q8NG99 324 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 GPR32P1Q8NGA4 272 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 OR2V1Q8NHB1 315 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM239Q8WW34 195 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 CPNE4Q96A23 557 aaPredicted RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 TEAD3Q99594 435 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 SULT4A1Q9BR01 284 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 TOLLIPQ9H0E2 274 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 CST11Q9H112 138 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 ATG5Q9H1Y0 275 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 SYT4Q9H2B2 425 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 OR52D1Q9H346 318 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 METTL1Q9UBP6 276 aaKnown RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 PEF1Q9UBV8 284 aaKnown RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 IKZF2Q9UKS7 526 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 FLVCR2Q9UPI3 526 aa2.9□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF443Q9Y2A4 671 aaPredicted RBP2.9□□□□□ -1.95
CCDC171-207ENST00000478913 IGHV3-15A0A0B4J1V0 119 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 PIGBOS1A0A0B4J2F0 54 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 IGHV3-66A0A0C4DH42 116 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 A0A0J9YW62 118 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms