RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ODAMA1E959 279 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 OR2T8A6NH00 312 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 NDUFC2-KCTD14E9PQ53 114 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 TMEM250H0YL14 139 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 UPK2O00526 184 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 PIRO00625 290 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 SS18L1O75177 396 aaPredicted RBP2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 CDK2AP2O75956 126 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 DUSP14O95147 198 aaKnown RBP2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 UBL3O95164 117 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 APOMO95445 188 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 MT-ATP8P03928 68 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 CECR9P0C854 216 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 HLA-DMBP28068 263 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 SRP14P37108 136 aaKnown RBP2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 ZNF90Q03938 601 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 ERCC8Q13216 396 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 NSUN5P1Q3KNT7 163 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 KIAA1644Q3SXP7 199 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 CENPWQ5EE01 88 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 GFI1BQ5VTD9 330 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 C1orf140Q5VVS0 124 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 ZNF57Q68EA5 555 aaPredicted RBP2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 OR2T2Q6IF00 324 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 C11orf71Q6IPW1 123 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 C22orf39Q6P5X5 142 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 ZIC4Q8N9L1 334 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 C11orf72Q8NBR9 251 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 OR4X2Q8NGF9 303 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 OR4K13Q8NH42 304 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 SGMS2Q8NHU3 365 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 KLK6Q92876 244 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 MUCL1Q96DR8 90 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 GNPNAT1Q96EK6 184 aaPredicted RBP2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 BORCS8Q96FH0 119 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 C2orf50Q96LR7 162 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 MCEEQ96PE7 176 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 OR2A5Q96R48 311 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 NMNAT3Q96T66 252 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 SOSTQ9BQB4 213 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 PLA2G2FQ9BZM2 168 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 NAA60Q9H7X0 242 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 TMEM100Q9NV29 134 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 C21orf62Q9NYP8 219 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 C19orf25Q9UFG5 118 aaPredicted RBP2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 RABAC1Q9UI14 185 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 VSIG4Q9Y279 399 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 TPRKBQ9Y3C4 175 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 PLXNB2O15031 1838 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 VWA8A3KMH1 1905 aa2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 COL2A1P02458 1487 aaPredicted RBP2.69□□□□□ -1.98
FNDC3B-209ENST00000478016 LAMA2P24043 3122 aaKnown RBP2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 LTBP2Q14767 1821 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 PARP14Q460N5 1801 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 TRAV12-2A0A075B6T6 113 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 TRAV8-6A0A0B4J262 113 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 IGHV1-58A0A0C4DH39 117 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 C3orf85A0A1B0GTC6 90 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 C7orf77A4D0Y5 90 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 TLCD2A6NGC4 264 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 FAM220BPB1ANY3 271 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 H3BRM9 83 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 GSTZ1O43708 216 aaPredicted RBP2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 SLC37A4O43826 429 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 ANGPTL7O43827 346 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 NDUFS5O43920 106 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 PITX3O75364 302 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 HYPMO75409 117 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 SRSF10O75494 262 aaKnown RBP2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 NDUFB6O95139 128 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 NDUFB2O95178 105 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 PMS2P2O95744 297 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 LINC00869P0C866 280 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 TRGC1P0CF51 173 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 HLA-DOBP13765 273 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 GADD45AP24522 165 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 ASIPP42127 132 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 POLR2JP52435 117 aaKnown RBP2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 CRISP3P54108 245 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 HERV-K104P61576 105 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 SEC11AP67812 179 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 FOXF1Q12946 379 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 LYRM7Q5U5X0 104 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 FAM222AQ5U5X8 452 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 CLEC19AQ6UXS0 136 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 SHISA6Q6ZSJ9 500 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 CLEC20AQ6ZU45 233 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 GTSCR1Q86UQ5 136 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 C1orf174Q8IYL3 243 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 LINC00471Q8N535 108 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 LINC00311Q8N616 119 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 TCEANCQ8N8B7 351 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 ZFP41Q8N8Y5 198 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 APCDD1LQ8NCL9 501 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 SMRP1Q8NCR6 262 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 SPACA5Q96QH8 159 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 AGPAT4-IT1Q9H0P7 198 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 BCL2L10Q9HD36 194 aa2.68□□□□□ -1.98
FNDC3B-209ENST00000478016 CALYQ9NYX4 217 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms