RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 TRAV25A0A0B4J276 109 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 IGHV3-66A0A0C4DH42 116 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 WRBO00258 174 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 SYNGR2O43760 224 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 UPK1BO75841 260 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 IFNA4P05014 189 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 NHLRC4P0CG21 123 aaPredicted RBP16.73■□□□□ 0.27
SF1-214ENST00000477596 OR10J1P30954 320 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 NOXA1Q86UR1 476 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 PAIP2BQ9ULR5 123 aaKnown RBP16.73■□□□□ 0.27
SF1-214ENST00000477596 TENM3Q9P273 2699 aa16.73■□□□□ 0.27
SF1-214ENST00000477596 FAM240BA0A1B0GVZ2 78 aa16.72■□□□□ 0.27
SF1-214ENST00000477596 OR11H12B2RN74 326 aa16.72■□□□□ 0.27
SF1-214ENST00000477596 MED6O75586 246 aa16.72■□□□□ 0.27
SF1-214ENST00000477596 OR4D5Q8NGN0 318 aa16.72■□□□□ 0.27
SF1-214ENST00000477596 ST8SIA2Q92186 375 aa16.72■□□□□ 0.27
SF1-214ENST00000477596 GINS3Q9BRX5 216 aa16.72■□□□□ 0.27
SF1-214ENST00000477596 TUBA4BQ9H853 241 aa16.72■□□□□ 0.27
SF1-214ENST00000477596 H3BP45 60 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 CCSO14618 274 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 TSPAN4O14817 238 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 IFNA21P01568 189 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 H2AFB2P0C5Z0 115 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 POLR2GP62487 172 aaKnown RBP eCLIP16.71■□□□□ 0.27
SF1-214ENST00000477596 ETFRF1Q6IPR1 90 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 LILRB2Q8N423 598 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 OR1S2Q8NGQ3 325 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 SPAG8Q99932 426 aaPredicted RBP16.71■□□□□ 0.27
SF1-214ENST00000477596 SRD5A3Q9H8P0 318 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 U3KQK5 164 aa16.71■□□□□ 0.27
SF1-214ENST00000477596 STAB2Q8WWQ8 2551 aa16.71■□□□□ 0.26
SF1-214ENST00000477596 IGKV3-7A0A075B6H7 116 aa16.7■□□□□ 0.26
SF1-214ENST00000477596 TRAV30A0A087WSZ9 112 aa16.7■□□□□ 0.26
SF1-214ENST00000477596 MZT2BQ6NZ67 158 aa16.7■□□□□ 0.26
SF1-214ENST00000477596 UBQLN2Q9UHD9 624 aa16.7■□□□□ 0.26
SF1-214ENST00000477596 RBMY1BA6NDE4 496 aaKnown RBP16.69■□□□□ 0.26
SF1-214ENST00000477596 RBMY1EA6NEQ0 496 aaKnown RBP16.69■□□□□ 0.26
SF1-214ENST00000477596 SCGB2A1O75556 95 aa16.69■□□□□ 0.26
SF1-214ENST00000477596 RBMY1DP0C7P1 496 aaKnown RBP16.69■□□□□ 0.26
SF1-214ENST00000477596 ID3Q02535 119 aa16.69■□□□□ 0.26
SF1-214ENST00000477596 IAH1Q2TAA2 248 aaPredicted RBP16.69■□□□□ 0.26
SF1-214ENST00000477596 LAMTOR1Q6IAA8 161 aa16.69■□□□□ 0.26
SF1-214ENST00000477596 ZNF431Q8TF32 576 aaPredicted RBP16.69■□□□□ 0.26
SF1-214ENST00000477596 CIB3Q96Q77 187 aaPredicted RBP16.69■□□□□ 0.26
SF1-214ENST00000477596 SSSCA1O60232 199 aa16.68■□□□□ 0.26
SF1-214ENST00000477596 SCGB1D2O95969 90 aa16.68■□□□□ 0.26
SF1-214ENST00000477596 NKX2-1P43699 371 aaPredicted RBP16.68■□□□□ 0.26
SF1-214ENST00000477596 ATP5IP56385 69 aaPredicted RBP16.68■□□□□ 0.26
SF1-214ENST00000477596 GAMTQ14353 236 aa16.68■□□□□ 0.26
SF1-214ENST00000477596 HAGHQ16775 308 aa16.68■□□□□ 0.26
SF1-214ENST00000477596 SPANXN5Q5MJ07 72 aa16.68■□□□□ 0.26
SF1-214ENST00000477596 ZBTB8BQ8NAP8 495 aaPredicted RBP16.68■□□□□ 0.26
SF1-214ENST00000477596 VSIRQ9H7M9 311 aa16.68■□□□□ 0.26
SF1-214ENST00000477596 PRSS46E5RG02 174 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 TFPI2P48307 235 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 YPEL3P61236 119 aaPredicted RBP16.67■□□□□ 0.26
SF1-214ENST00000477596 RAB11AP62491 216 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 ODF3L2Q3SX64 289 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 FAM90A2PQ658T7 463 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 LINC00322Q6ZN03 302 aaPredicted RBP16.67■□□□□ 0.26
SF1-214ENST00000477596 TCF24Q7RTU0 167 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 SLC35E1Q96K37 410 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 RCHY1Q96PM5 261 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 CITED4Q96RK1 184 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 TM2D3Q9BRN9 247 aa16.67■□□□□ 0.26
SF1-214ENST00000477596 IGKV1D-37A0A075B6S9 117 aa16.66■□□□□ 0.26
SF1-214ENST00000477596 GPX4P36969 197 aaPredicted RBP16.66■□□□□ 0.26
SF1-214ENST00000477596 USF2Q15853 346 aaPredicted RBP16.66■□□□□ 0.26
SF1-214ENST00000477596 GBGT1Q8N5D6 347 aa16.66■□□□□ 0.26
SF1-214ENST00000477596 ENKURQ8TC29 256 aa16.66■□□□□ 0.26
SF1-214ENST00000477596 METTL26Q96S19 204 aa16.66■□□□□ 0.26
SF1-214ENST00000477596 GSKIPQ9P0R6 139 aa16.66■□□□□ 0.26
SF1-214ENST00000477596 DFFBO76075 338 aa16.65■□□□□ 0.26
SF1-214ENST00000477596 TOMM40O96008 361 aa16.65■□□□□ 0.26
SF1-214ENST00000477596 IL4P05112 153 aa16.65■□□□□ 0.26
SF1-214ENST00000477596 NPPCP23582 126 aa16.65■□□□□ 0.26
SF1-214ENST00000477596 CRYBB3P26998 211 aa16.65■□□□□ 0.26
SF1-214ENST00000477596 Q8WTZ3 238 aa16.65■□□□□ 0.26
SF1-214ENST00000477596 RETNQ9HD89 108 aa16.65■□□□□ 0.26
SF1-214ENST00000477596 RCL1Q9Y2P8 373 aaKnown RBP16.65■□□□□ 0.26
SF1-214ENST00000477596 OR4C46A6NHA9 309 aa16.64■□□□□ 0.25
SF1-214ENST00000477596 FAM25EA8MYX2 175 aa16.64■□□□□ 0.25
SF1-214ENST00000477596 CCNKO75909 580 aa16.64■□□□□ 0.25
SF1-214ENST00000477596 PSG1P11464 419 aa16.64■□□□□ 0.25
SF1-214ENST00000477596 PAX9P55771 341 aa16.64■□□□□ 0.25
SF1-214ENST00000477596 ZNF90Q03938 601 aa16.64■□□□□ 0.25
SF1-214ENST00000477596 C12orf45Q8N5I9 185 aaPredicted RBP16.64■□□□□ 0.25
SF1-214ENST00000477596 PSENENQ9NZ42 101 aa16.64■□□□□ 0.25
SF1-214ENST00000477596 STRAPQ9Y3F4 350 aaKnown RBP16.64■□□□□ 0.25
SF1-214ENST00000477596 IGKV1OR2-108A0A075B7D4 117 aa16.63■□□□□ 0.25
SF1-214ENST00000477596 ZFP92A6NM28 416 aa16.63■□□□□ 0.25
SF1-214ENST00000477596 RD3LP0DJH9 198 aa16.63■□□□□ 0.25
SF1-214ENST00000477596 BMI1P35226 326 aa16.63■□□□□ 0.25
SF1-214ENST00000477596 RPP30P78346 268 aaKnown RBP16.63■□□□□ 0.25
SF1-214ENST00000477596 NRARPQ7Z6K4 114 aa16.63■□□□□ 0.25
SF1-214ENST00000477596 NBEAL2Q6ZNJ1 2754 aa16.62■□□□□ 0.25
SF1-214ENST00000477596 MBPP02686 304 aaPredicted RBP16.62■□□□□ 0.25
SF1-214ENST00000477596 P2RY1P47900 373 aa16.62■□□□□ 0.25
SF1-214ENST00000477596 ZNF124Q15973 351 aa16.62■□□□□ 0.25
SF1-214ENST00000477596 ACOT7LQ6ZUV0 252 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms