RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CD69Q07108 199 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 TMEM14EPQ6UXP3 125 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 UNQ9165/PRO28630Q6UXU0 137 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 STX12Q86Y82 276 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 Q8N1Y9 231 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 TMEM252Q8N6L7 170 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 OR11H4Q8NGC9 324 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 ZNF502Q8TBZ5 544 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 ELOVL1Q9BW60 279 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 PAIP2BQ9ULR5 123 aaKnown RBP13.38□□□□□ -0.27
PTPN7-209ENST00000477554 TNFSF18Q9UNG2 199 aa13.38□□□□□ -0.27
PTPN7-209ENST00000477554 CORTO00230 105 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 IFNA4P05014 189 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 CLEC3BP05452 202 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 HIST1H1BP16401 226 aaKnown RBP13.37□□□□□ -0.27
PTPN7-209ENST00000477554 GPR183P32249 361 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 BAXQ07812 192 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 EEF1AKMT3Q96AZ1 226 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 AQP10Q96PS8 301 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 THYN1Q9P016 225 aa13.37□□□□□ -0.27
PTPN7-209ENST00000477554 ARPC5O15511 151 aa13.36□□□□□ -0.27
PTPN7-209ENST00000477554 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
PTPN7-209ENST00000477554 METTL15P1P0C7V9 234 aa13.36□□□□□ -0.27
PTPN7-209ENST00000477554 SULT1A1P50225 295 aa13.36□□□□□ -0.27
PTPN7-209ENST00000477554 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
PTPN7-209ENST00000477554 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
PTPN7-209ENST00000477554 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
PTPN7-209ENST00000477554 IGHV3OR16-8A0A075B7F1 116 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 IGSF23A1L1A6 192 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 K7EIM0 57 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 GGCTO75223 188 aaKnown RBP13.35□□□□□ -0.27
PTPN7-209ENST00000477554 HBG1P69891 147 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 HBG2P69892 147 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 EWSR1Q01844 656 aaKnown RBP eCLIP13.35□□□□□ -0.27
PTPN7-209ENST00000477554 OR10P1Q8NGE3 313 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 TMEM170AQ8WVE7 144 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 MFFQ9GZY8 342 aa13.35□□□□□ -0.27
PTPN7-209ENST00000477554 TMEM213A2RRL7 107 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 OR2T8A6NH00 312 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 C2orf70A6NJV1 201 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 S100A11P31949 105 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 OR2F1Q13607 317 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 ZNF345Q14585 488 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 CD300EQ496F6 205 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-209ENST00000477554 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 SBSPONQ8IVN8 264 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 SCARB1Q8WTV0 552 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 PINX1Q96BK5 328 aaKnown RBP13.34□□□□□ -0.27
PTPN7-209ENST00000477554 CHRDL1Q9BU40 450 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 TENM3Q9P273 2699 aa13.34□□□□□ -0.27
PTPN7-209ENST00000477554 RNF222A6NCQ9 220 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 PMS2P5A8MQ11 134 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 CST7O76096 145 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 HNRNPCP07910 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN7-209ENST00000477554 FOLR2P14207 255 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 TM4SF20Q53R12 229 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 ETFRF1Q6IPR1 90 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 MISP3Q96FF7 219 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 ZMAT5Q9UDW3 170 aaKnown RBP13.33□□□□□ -0.28
PTPN7-209ENST00000477554 SMAD5-AS1Q9Y6J3 95 aa13.33□□□□□ -0.28
PTPN7-209ENST00000477554 TRBV7-1A0A0A6YYK4 115 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 A0A0D9SG52 128 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 RPS10-NUDT3A0A1W2PQS6 291 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 ZNF320A2RRD8 509 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 FRMD6-AS1P0C7T7 363 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 ADMP35318 185 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 GPX4P36969 197 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-209ENST00000477554 OPRK1P41145 380 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 EIF2B2P49770 351 aaKnown RBP13.32□□□□□ -0.28
PTPN7-209ENST00000477554 AP2S1P53680 142 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-209ENST00000477554 NHLH2Q02577 135 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 GPHB5Q86YW7 130 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 TMEM217Q8N7C4 229 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 OR1S2Q8NGQ3 325 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 GGACTQ9BVM4 153 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 WFDC10AQ9H1F0 79 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 MLXQ9UH92 298 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 DNAH7Q8WXX0 4024 aa13.32□□□□□ -0.28
PTPN7-209ENST00000477554 ATP6V1FQ16864 119 aa13.31□□□□□ -0.28
PTPN7-209ENST00000477554 DEFB114Q30KQ6 69 aa13.31□□□□□ -0.28
PTPN7-209ENST00000477554 LILRB2Q8N423 598 aa13.31□□□□□ -0.28
PTPN7-209ENST00000477554 CXorf58Q96LI9 332 aa13.31□□□□□ -0.28
PTPN7-209ENST00000477554 SIGLEC8Q9NYZ4 499 aa13.31□□□□□ -0.28
PTPN7-209ENST00000477554 ZNF785A8K8V0 405 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 I3L2K1 104 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 IGHV4-30-4P0DP06 118 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 DLK1P80370 383 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 SLC38A11Q08AI6 406 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 KCNRGQ8N5I3 272 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 UBAC2Q8NBM4 344 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 OR5C1Q8NGR4 320 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 VN1R17PQ8TDU5 208 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 PEMTQ9UBM1 199 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 FNDC10F2Z333 226 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 BOLA2-SMG1P6H3BVE0 249 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 LGALS9O00182 355 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 TGOLN2O43493 480 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms