RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 C1QTNF4Q9BXJ3 329 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 HRH4Q9H3N8 390 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 NSG2Q9Y328 171 aa5.33□□□□□ -1.56
BRCA1-214ENST00000477152 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 HELTA6NFD8 242 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 IFNA17P01571 189 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 MIFP14174 115 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 NPY1RP25929 384 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 RCVRNP35243 200 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 PHLDA2Q53GA4 152 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 TBC1D26Q86UD7 250 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 NOXA1Q86UR1 476 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 GBGT1Q8N5D6 347 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 CCDC71LQ8N9Z2 235 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 RNASE11Q8TAA1 199 aaKnown RBP5.32□□□□□ -1.56
BRCA1-214ENST00000477152 TMEM230Q96A57 120 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 RABAC1Q9UI14 185 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 ANAPC10Q9UM13 185 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
BRCA1-214ENST00000477152 CSMD3Q7Z407 3707 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 TRAV10A0A0B4J240 114 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 I3L2K1 104 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 PGAM2P15259 253 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 HRH1P35367 487 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 AKR1C2P52895 323 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 DEFB131AP59861 70 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 NEDD8Q15843 81 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 LINC00336Q6ZUF6 198 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 ZFAND1Q8TCF1 268 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 RRNAD1Q96FB5 475 aaKnown RBP5.31□□□□□ -1.56
BRCA1-214ENST00000477152 MS4A6AQ9H2W1 248 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 VSIRQ9H7M9 311 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 IGHV3OR16-8A0A075B7F1 116 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 INS-IGF2F8WCM5 200 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 APOA1P02647 267 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 HLA-DMAP28067 261 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 NUP62P37198 522 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-214ENST00000477152 HOXA1P49639 335 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-214ENST00000477152 MFAP2P55001 183 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 NANOS2P60321 138 aaKnown RBP5.31□□□□□ -1.56
BRCA1-214ENST00000477152 ETFRF1Q6IPR1 90 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 TOMM20LQ6UXN7 152 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 SEC22AQ96IW7 307 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 FXYD6Q9H0Q3 95 aa5.31□□□□□ -1.56
BRCA1-214ENST00000477152 PUS1Q9Y606 427 aaKnown RBP eCLIP5.31□□□□□ -1.56
BRCA1-214ENST00000477152 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 IGHV3-49A0A0A0MS15 119 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 PIGBOS1A0A0B4J2F0 54 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 PGPEP1LA6NFU8 196 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 IGLL5B9A064 214 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 GSTZ1O43708 216 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-214ENST00000477152 TMEM50AO95807 157 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 TBPP20226 339 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 OPRK1P41145 380 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 RND3P61587 244 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 SNRPD3P62318 126 aaKnown RBP5.3□□□□□ -1.56
BRCA1-214ENST00000477152 EWSR1Q01844 656 aaKnown RBP eCLIP5.3□□□□□ -1.56
BRCA1-214ENST00000477152 RPP25LQ8N5L8 163 aaKnown RBP5.3□□□□□ -1.56
BRCA1-214ENST00000477152 STXBP6Q8NFX7 210 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 Q8WTZ3 238 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 AP3S1Q92572 193 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 COPZ2Q9P299 210 aa5.3□□□□□ -1.56
BRCA1-214ENST00000477152 A0A087WXM4 84 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 CLN5O75503 358 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 ATP6V1G2O95670 118 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 SLC25A4P12235 298 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 HTR2BP41595 481 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 RPL5P46777 297 aaKnown RBP5.29□□□□□ -1.56
BRCA1-214ENST00000477152 TRIM16LQ309B1 348 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 RNASE10Q5GAN6 216 aaKnown RBP5.29□□□□□ -1.56
BRCA1-214ENST00000477152 FAM219AQ8IW50 185 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 ARRDC1Q8N5I2 433 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 GPX8Q8TED1 209 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 MRGPRFQ96AM1 343 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 IGHV3OR16-13A0A075B7E8 117 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 IGHV3-74A0A0B4J1X5 117 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 TEX48A0A1B0GUV7 120 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 DEDDO75618 318 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 TNFAIP8O95379 198 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 P0DMU3 169 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 FAM231AP0DMU4 169 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 FAM231CP0DMU5 169 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 P2RY1P47900 373 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 OR1S2Q8NGQ3 325 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 OR4X1Q8NH49 305 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 ZNF414Q96IQ9 312 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 RNF126Q9BV68 326 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 RNF167Q9H6Y7 350 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 COMMD3Q9UBI1 195 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 TBC1D24Q9ULP9 559 aa5.29□□□□□ -1.56
BRCA1-214ENST00000477152 C3orf85A0A1B0GTC6 90 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 TMEM189A5PLL7 270 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 FAM25AB3EWG3 89 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 FAM25CB3EWG5 89 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 FAM25GB3EWG6 89 aa5.28□□□□□ -1.56
BRCA1-214ENST00000477152 FABP1P07148 127 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms