RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SSR3Q9UNL2 185 aa11.59□□□□□ -0.55
APOBEC3F-203ENST00000476513 YTHDF2Q9Y5A9 579 aaKnown RBP11.59□□□□□ -0.55
APOBEC3F-203ENST00000476513 TRAV30A0A087WSZ9 112 aa11.58□□□□□ -0.56
APOBEC3F-203ENST00000476513 A0A0B4J293 547 aa11.58□□□□□ -0.56
APOBEC3F-203ENST00000476513 NAT1P18440 290 aa11.58□□□□□ -0.56
APOBEC3F-203ENST00000476513 NRG4Q8WWG1 115 aa11.58□□□□□ -0.56
APOBEC3F-203ENST00000476513 BLOC1S6Q9UL45 172 aa11.58□□□□□ -0.56
APOBEC3F-203ENST00000476513 LOC102723971A0A1B0GUV8 181 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 IGKV1-5P01602 117 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 IGLC1P0CG04 106 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 PSMB9P28065 219 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 DAD1P61803 113 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 USF2Q15853 346 aaPredicted RBP11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 LPCAT3Q6P1A2 487 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 LYSMD2Q8IV50 215 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 Q8WTZ3 238 aa11.57□□□□□ -0.56
APOBEC3F-203ENST00000476513 HBE1P02100 147 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 P0C879 139 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 HRH1P35367 487 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 ETV6P41212 452 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 HOXA1P49639 335 aaPredicted RBP11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 DHODHQ02127 395 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 GSG1LQ6UXU4 331 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 SIGLEC15Q6ZMC9 328 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 C1orf158Q8N1D5 194 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 OR1S2Q8NGQ3 325 aa11.56□□□□□ -0.56
APOBEC3F-203ENST00000476513 BUB3O43684 328 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 HLA-DMAP28067 261 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 TAS2R20P59543 309 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 YPEL3P61236 119 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 BSXQ3C1V8 233 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 CNBD2Q96M20 576 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 CLUHP3Q96NS8 147 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 SLC35B3Q9H1N7 401 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 SAV1Q9H4B6 383 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 GOLT1BQ9Y3E0 138 aa11.55□□□□□ -0.56
APOBEC3F-203ENST00000476513 EPM2AB3EWF7 344 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 IL4P05112 153 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 OR10J1P30954 320 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 RND2P52198 227 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 KRTAP10-2P60368 255 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 PRSS54Q6PEW0 395 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 FOXI2Q6ZQN5 318 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 OR4B1Q8NGF8 309 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 S100A16Q96FQ6 103 aaKnown RBP11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 C7orf50Q9BRJ6 194 aaKnown RBP11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 PDCD10Q9BUL8 212 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 VCX3BQ9H321 246 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 ENY2Q9NPA8 101 aa11.54□□□□□ -0.56
APOBEC3F-203ENST00000476513 RPS10-NUDT3A0A1W2PQS6 291 aa11.53□□□□□ -0.56
APOBEC3F-203ENST00000476513 AKR1C2P52895 323 aa11.53□□□□□ -0.56
APOBEC3F-203ENST00000476513 UCP3P55916 312 aa11.53□□□□□ -0.56
APOBEC3F-203ENST00000476513 TSPAN5P62079 268 aa11.53□□□□□ -0.56
APOBEC3F-203ENST00000476513 RRN3P1Q2M238 152 aa11.53□□□□□ -0.56
APOBEC3F-203ENST00000476513 LINC00052Q96N35 136 aa11.53□□□□□ -0.56
APOBEC3F-203ENST00000476513 GSTZ1O43708 216 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 INAFM2P0DMQ5 153 aa11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 ALDH3B2P48448 385 aa11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 HSPA13P48723 471 aa11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 ZNF79Q15937 498 aa11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 TMEM69Q5SWH9 247 aa11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 SPARTQ8N0X7 666 aa11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.57
APOBEC3F-203ENST00000476513 NUDT3O95989 172 aa11.51□□□□□ -0.57
APOBEC3F-203ENST00000476513 PRSS3P35030 304 aa11.51□□□□□ -0.57
APOBEC3F-203ENST00000476513 GABARAPL2P60520 117 aa11.51□□□□□ -0.57
APOBEC3F-203ENST00000476513 PSG9Q00887 426 aa11.51□□□□□ -0.57
APOBEC3F-203ENST00000476513 TP53RKQ96S44 253 aa11.51□□□□□ -0.57
APOBEC3F-203ENST00000476513 SCPEP1Q9HB40 452 aa11.51□□□□□ -0.57
APOBEC3F-203ENST00000476513 BATF3Q9NR55 127 aa11.51□□□□□ -0.57
APOBEC3F-203ENST00000476513 LOC100506127A0A0U1RQW1 187 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 SLC25A4P12235 298 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 RORCP51449 518 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 CCL18P55774 89 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 UBE2NLQ5JXB2 153 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 FAM78BQ5VT40 261 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 FCGR1BQ92637 280 aa11.5□□□□□ -0.57
APOBEC3F-203ENST00000476513 A0A0G2JRQ6 117 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 F6UB75 175 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 SOCS3O14543 225 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 TMEM127O75204 238 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 NXPH3O95157 252 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 TOMM40O96008 361 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 PI3P19957 117 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 ID1P41134 155 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 HTR2BP41595 481 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 PSMB3P49720 205 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 RND3P61587 244 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 SPATA31B1PQ5VZV4 182 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 COQ8AQ8NI60 647 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 MAGT1Q9H0U3 335 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 KLK11Q9UBX7 282 aa11.49□□□□□ -0.57
APOBEC3F-203ENST00000476513 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 F5H768 121 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 ATG12O94817 140 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
APOBEC3F-203ENST00000476513 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms